New model in OGS2.0 | DPOGS211340  |
---|---|
Genomic Position | scaffold429:- 31549-33907 |
See gene structure | |
CDS Length | 1533 |
Paired RNAseq reads   | 134 |
Single RNAseq reads   | 394 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008460 (3e-118) |
Best Drosophila hit   | CG15896 (3e-50) |
Best Human hit | mitochondrial ribonuclease P protein 3 precursor (1e-38) |
Best NR hit (blastp)   | AGAP001968-PA [Anopheles gambiae str. PEST] (1e-59) |
Best NR hit (blastx)   | GL14442 [Drosophila persimilis] (2e-55) |
GeneOntology terms    | GO:0008033 tRNA processing GO:0005739 mitochondrion |
InterPro families   | ND |
Orthology group | MCL14617 |
Nucleotide sequence:
ATGCCTGTTAATAATAATATGTTGATCTTATGTCAAAGGTTCATAAATAAGCCTTCTACT
GATGCTATTGATCAAATTAGTTACTTAAAAAGTAGTATTGATAATAAAGAGATGGATTGG
AAAGGGATTAAAGAAAATGTTCTTCTAAAAAGAGGTTCTTTGAACCCAAAAAATATAGAT
GCTGTTATGTTAAAAGTTATGGTTGGGGAAAAAAAATTTGATGCAGCATTATCCTATGCT
AGCTATCTGAAATTATCTAGTGATGATTTATCTTTAGGTGCAATAAATGGACTACTAAAC
TTTTATTATGAATATTCTAAGGAAAATGATCTGTCAAAGAATGAAAAAGAATTCATTTTA
AATACCTATGACCAGTTGTATAAAAAATATAAAGTGCTAGACTACACTACTTGTGAAAAA
CTGCTTCATGCTTTATGTGCTATTAATGAAACGAAAAAGTGTAAAAGACTTTTAAGTGAT
ATCCACTTAAGTTCTGTGCCAACTCATTCAGCATATAGTACACTGATAGGTACACTATTT
AAAAATAATAATAAAGCTGAGGCTATGAAATTTATACAATTAAGTTTGAACGATAAAAGA
CCTCTTCAGGATGCCGCCTATGATGAATGGATTAGATATATTTTCAGGAGATATAAAGAT
AAAAATACTATGCTAAAATATTTAAATGAAATATGTCTTCACATATCAAACAATTGTGAA
GTTGTAACTTTAACAACAGCTACAAGACTGAAGGAAGCTTTTGAGGAGCTGAATTTTATT
GGTAGATTTACACAAATAAAAAAGCAAAGTGGACATTGTGAATGTTGTAATTTAAAATTA
GACTGTATAAAGTTGTCTGAAGATGAATTTGCCACTCTCCAGAGGGTTGTCAAGGAAAAA
TTAATACTTGGGAACGACCTCTTTTTGAAGACATCTCCTGAAGAGCTTAAAAGATTTACA
AGTTTTGTTGAAAAGACAGCACCTTATGATATCGTTTTAGACGCATTAAACATAGCTTAC
AGCATAGGAAAAGGTGATGTGAATGAAAGAATAAAAATACTTAACTTAGTAGTAAATCAC
TTCCTAGATCAAAATAAGAAAATATTGTTTCTGGGCAGGCAGCACATGTTGAGCTGGAAG
AGGGGTACATTAATGCATACTGTAAAGAAAGTCTATAGCTTTTTTACAGATGATATTTCT
CAGGATGATCCGTACTTTATAACAGCGGCGATACTCAGTGGACCGGAAACAGATATTGTA
TCGAGAGATCTTTTAAGGGGTCATAGGTTCCTTCTGCAGCATGAAAACCTGCAACGTTTG
TTTCAAATGTGGCAGTGGCAGCACCAATGGATGGTATTCGTTCCAAGACATAAAGCCATC
ATACAGGCCCCGCTGACATTTACACCTTGTGCACAAAATCATGATAATAGTTGGCATCTG
CCATATCAACCGGAAAACATGCTGAATGCAGGACATCTTAATGATGGCACCCCTGATTGT
TCAAATTGGCTTTGTTTGAGAGCTAAAAATTAA
Protein sequence:
MPVNNNMLILCQRFINKPSTDAIDQISYLKSSIDNKEMDWKGIKENVLLKRGSLNPKNID
AVMLKVMVGEKKFDAALSYASYLKLSSDDLSLGAINGLLNFYYEYSKENDLSKNEKEFIL
NTYDQLYKKYKVLDYTTCEKLLHALCAINETKKCKRLLSDIHLSSVPTHSAYSTLIGTLF
KNNNKAEAMKFIQLSLNDKRPLQDAAYDEWIRYIFRRYKDKNTMLKYLNEICLHISNNCE
VVTLTTATRLKEAFEELNFIGRFTQIKKQSGHCECCNLKLDCIKLSEDEFATLQRVVKEK
LILGNDLFLKTSPEELKRFTSFVEKTAPYDIVLDALNIAYSIGKGDVNERIKILNLVVNH
FLDQNKKILFLGRQHMLSWKRGTLMHTVKKVYSFFTDDISQDDPYFITAAILSGPETDIV
SRDLLRGHRFLLQHENLQRLFQMWQWQHQWMVFVPRHKAIIQAPLTFTPCAQNHDNSWHL
PYQPENMLNAGHLNDGTPDCSNWLCLRAKN