| New model in OGS2.0 | DPOGS211367 |
|---|---|
| Genomic Position | scaffold429:+ 71602-76344 |
| See gene structure | |
| CDS Length | 1548 |
| Paired RNAseq reads | 458 |
| Single RNAseq reads | 1492 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008364 (0.0) |
| Best Drosophila hit | CoRest, isoform F (3e-104) |
| Best Human hit | REST corepressor 3 isoform a (4e-92) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC007336 [Tribolium castaneum] (1e-150) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC007336 [Tribolium castaneum] (3e-146) |
| GeneOntology terms | GO:0003677 DNA binding GO:0005634 nucleus GO:0016564 transcription repressor activity GO:0045892 negative regulation of transcription, DNA-dependent GO:0003714 transcription corepressor activity GO:0003682 chromatin binding GO:0005515 protein binding |
| InterPro families | IPR014778 Myb, DNA-binding IPR000949 ELM2 domain IPR009057 Homeodomain-like IPR001005 SANT domain, DNA binding IPR012287 Homeodomain-related IPR017884 SANT, eukarya |
| Orthology group | MCL12003 |
Nucleotide sequence:
ATGGTCTTGGCTGAAAGAAATAATGATGTTCGAAACGGCAAGCGTTCGAGAGGACCAAGC
CCGAATGGCCATGGTAGCCCTGATTCTAGCTCCGAGGATGAGAATGCTGAAAAAATAAGG
GTTGGTCGAGATTATCAGGCTGTGTGTCCAGAGTTGGAACCTCTGGAGCAAAGAAGACCT
GATCAGATTTCGGATAGAGCTCTTTTAGTTTGGTCACCTACATGTGACATATCTGATACC
AAATTGGATGAGTACATAACAACAGCTAAGGAAAAATATGGATACAATGGTGAACAAGCT
CTTGGAATGTTGTTCTGGCACAAACATGATCTCAATAGGGCTTCAATGGACCTTGCAAAC
TTTACACCTTTTCCAGATGAATGGACAGTGGAAGACAAGGTGTTATTTGAGCAGGCTTTC
CAGTTTCATGGCAAGAGCTTTCATAGAATAAGGCAAATGTTGCCAGATAAATCAATTGCA
TCATTAGTGAAGTATTACTACTCATGGAAAAAGACAAGAGCTCGTACATCGTTGATGGAT
GTTGTGAGTGAGGGCCGTAATGCTGCAGGATCAGGAAGTGGCAAAAGGGATTCCGGTGCT
GGTTCTGAACCTGGCGGTTCAGATAAAGATTCTGACAATGATGAAAAGAAGTGGACGTTA
CACCGTGGTGTAGTACGTGGTGGGAACTGTGGGATCTCGCGCGCCGGTTTAGAGGGTGAC
GGAGGCGATGGGGGCAAGTGGTGCACCGTGTGCGGCATTCTGTGCTCCCAGACCACGCCG
CACAACTCGCACAAGTTGTGTCAGGCATGCCTCGTGCACGCCAGACGGACGGGCAGTATG
CGACCTCTGTGCGGGCCTTCTGGGAGACGAGGTGCGGGCAAACAGCAGCGTTACAAGCAT
CGCCTGCCTCGTGGCATTTACATCAACCACGACGATCTGGTTGCCATGGCGACGGGGCCG
CAACCCGGCGACCGCAACCACAACCAGAACCAGAACCAGGGCGAGGCTGTGCTCAGAGCA
ATGGACAGAGAGATTATATCGCTGAAGAGACAAGTTCAACAAAACAAGCAGCAATTAAGT
GCATTGAAGCGTAAAGTTGGTGATACCGGAGTAGAGGAGCTTAGACCTGGCGAACCACCC
GCCAAGATAAACTCCAGGTGGACCAACGACGAACTACTAATGGCAGTGACGGCTGTTAGG
AAGTATGGCAAGGATTTCCAAGCGATTGCAGAAACACTCGGAACAAAGACGGAATCCCAC
ATTCGTACATTTTTCATTTCTTACCGCCGTCGATACAACTTGGATGCCGTACTCAGAGAG
CATGAGGCAGACAGACAAAATGAAAATCATATACAACCAGGCACAACAAGCACAGAGTCG
AATGAAAATGATGTTGACAATAGTAATGCCAACAATGGAACCGGATCACCACAGACTAAC
GCTAAGGATGAAAAGACAGAGGTAGATAGTGAGGGAGTAGCAATCGGAGCGTCAGCTGAA
CAAGGCGGGCCGCCCACCACGCCGCCAAAACACAAGCATGCTAAGTGA
Protein sequence:
MVLAERNNDVRNGKRSRGPSPNGHGSPDSSSEDENAEKIRVGRDYQAVCPELEPLEQRRP
DQISDRALLVWSPTCDISDTKLDEYITTAKEKYGYNGEQALGMLFWHKHDLNRASMDLAN
FTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRARTSLMD
VVSEGRNAAGSGSGKRDSGAGSEPGGSDKDSDNDEKKWTLHRGVVRGGNCGISRAGLEGD
GGDGGKWCTVCGILCSQTTPHNSHKLCQACLVHARRTGSMRPLCGPSGRRGAGKQQRYKH
RLPRGIYINHDDLVAMATGPQPGDRNHNQNQNQGEAVLRAMDREIISLKRQVQQNKQQLS
ALKRKVGDTGVEELRPGEPPAKINSRWTNDELLMAVTAVRKYGKDFQAIAETLGTKTESH
IRTFFISYRRRYNLDAVLREHEADRQNENHIQPGTTSTESNENDVDNSNANNGTGSPQTN
AKDEKTEVDSEGVAIGASAEQGGPPTTPPKHKHAK