| New model in OGS2.0 | DPOGS209543 |
|---|---|
| Genomic Position | scaffold1231:- 83003-86149 |
| See gene structure | |
| CDS Length | 912 |
| Paired RNAseq reads | 1 |
| Single RNAseq reads | 3 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012413 (1e-102) |
| Best Drosophila hit | CG11093, isoform B (2e-67) |
| Best Human hit | PREDICTED: SKI family transcriptional corepressor 2-like (8e-59) |
| Best NR hit (blastp) | PREDICTED: similar to CG11093-PA isoform 1 [Apis mellifera] (7e-83) |
| Best NR hit (blastx) | PREDICTED: similar to CG11093-PA isoform 1 [Apis mellifera] (2e-76) |
| GeneOntology terms | GO:0000166 nucleotide binding GO:0005515 protein binding GO:0005634 nucleus |
| InterPro families | IPR023216 Transcription regulator SKI/SnoN IPR014890 c-SKI Smad4-binding domain IPR003380 Transforming protein Ski IPR010919 SAND domain-like IPR009061 DNA binding domain, putative |
| Orthology group | MCL14555 |
Nucleotide sequence:
ATGCCCGTCTCGTCTAGACGATGCGGTATGATAACACGTCGTGAGGCAGAGCGTCTTTGC
AAGTCTTTTTTGGGAGACAACGCACCACCTCGTCTCCCTGATGACTTCGCGTTTGCTGTC
CATCACGAATGCGCTTGGGGCTGTCGCGGAGCATTCCTGCCAGCGAGGTACAATTCATCA
CGCGCGAAGTGCATCAAGTGCGCTTACTGCGGTCTGTTTTTTTCGCCAAACAAATTCATC
TTCCACTCTCACCGCGTCGGTCCCGGTGATAAGTATGTACAGCCTGACGCTGCTAACTTC
AACTCCTGGAGACGGCACATGAAGCTGAGCGGCAGTCCGCCCGTGGAGGTTGTACACGCT
TGGGAAGACGTTAAGGCTATGTTCAACGGCGGAACTAGGAAACGTATGCTATCAGCCGCT
AGCATCGTTTTCGGTCTTAAATTCCGCATCAGACGCGTTGTTCGCAGGGAGGAACCGGAG
CCGAAGCGAGCGGCGTCGAGTCCCCCAGCGCCGCCCGTGCCGAGACTAGCGGACTATGTA
TGGGGAGCTCGCCTACCACTGCCGTACGCTATACCCTGGCTGAAACCAACCTTATGGTCT
CCTGGTGCCCTAACAGCCTTGAGCAGTGTAGGTGGTATAGAAGAGCCGCGAGCTTTCCGT
CCAGTCCGCTCTCATCGTCTGGAGTCACCACAACTCTCACCAACAGTGTCTCCCTCTATA
ACACCATCCAGGTCCCCGACTACATCTCCTCGACAATCTCGCTCACCCCTCCGCTCCCCG
CTGCGCTCGCCGCTCCGCTCATCACCGGCGCGCTCGTCTAAAAGTGATAGAGACAGTGAC
GAGAGTGTCGATATTGAGACCACAGAGGAAGATCAAATTAAGGACGCGGTATGTGCATAT
TATATATTTTAA
Protein sequence:
MPVSSRRCGMITRREAERLCKSFLGDNAPPRLPDDFAFAVHHECAWGCRGAFLPARYNSS
RAKCIKCAYCGLFFSPNKFIFHSHRVGPGDKYVQPDAANFNSWRRHMKLSGSPPVEVVHA
WEDVKAMFNGGTRKRMLSAASIVFGLKFRIRRVVRREEPEPKRAASSPPAPPVPRLADYV
WGARLPLPYAIPWLKPTLWSPGALTALSSVGGIEEPRAFRPVRSHRLESPQLSPTVSPSI
TPSRSPTTSPRQSRSPLRSPLRSPLRSSPARSSKSDRDSDESVDIETTEEDQIKDAVCAY
YIF