| New model in OGS2.0 | DPOGS200145 |
|---|---|
| Genomic Position | scaffold6177:- 5888-16778 |
| See gene structure | |
| CDS Length | 1416 |
| Paired RNAseq reads | 13528 |
| Single RNAseq reads | 32216 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002788 (5e-138) |
| Best Drosophila hit | paxillin, isoform B (6e-104) |
| Best Human hit | paxillin isoform 2 (6e-87) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC010609 [Tribolium castaneum] (1e-124) |
| Best NR hit (blastx) | PREDICTED: similar to paxillin [Tribolium castaneum] (1e-119) |
| GeneOntology terms | GO:0005925 focal adhesion GO:0007016 cytoskeletal anchoring at plasma membrane GO:0008270 zinc ion binding |
| InterPro families | IPR001781 Zinc finger, LIM-type |
| Orthology group | MCL13803 |
Nucleotide sequence:
ATGTTAGAGCGAGGGTATCCTCGAGGCTCGTGGCACTGCGGCCGAGACCCTGGTTCCGTA
AAAGGCTTACGAGTCTGGGCGTTCGATGCTCTGCTGGCTGATCTCCAGAACTCTATAAAC
CCTGGACGCGTCAGTAGTCCGGGGAGGACAACTTCCCCTGGAGGTAGGACAGTGTCCCCA
GGACGAACCGGCTCCCCGTTGGGTCGAGGCAGTTCCCCTGGCAGCCTCAGCTCCCCAACT
TCCACTGGTTATGGCTCCATCAACGGTTCGAGGAATATCAGCTCGGATTACGCTAAACCC
GCTTCCCCGACCTACCAGAACACAACATCTGTTCACGAGAAAAAGTTTACGAATTTCACC
AACTCCCCGGCGTACACACCACAAGCCAACAGCCACAGTCACAGTCAAAGCCACAATGGC
TACTCTCGCACCAATGGTGCCACGAGCCCCTCGTCCAGGCCCACTGTGGACTCCTTACTG
GACCAGCTCAGCACCGACGTAACTAATGGCCGTTCGTCTGTATCTCCGATCCCATCCGGT
ACTCTCCCGCGACCTGGCACCAAACAGGTGACGGTGACCGTTCAAGAGACGGTGGTCGAA
CCAGCCCAGGCACCACCACCACAGGCCACCACCGTGAGACACCATCACGCCTCCAGCGCT
ACTAAGGAGCTGGACGACTTGATGGCATCCCTCTCAGACTTTAAGGTAAGCGGCGGTGCA
GGTCCAGGCGAACAAGGGACCCACGTGTACAGAGAGAGGAAAGCCTGGGAGGAACATTAC
CGCAGCCCGCAACCGGAGGCCGCTTCGCTGGAACACATGCTTGGCTCTCTTCGAGCAGAC
ATGAGCCGCCAAGGAGTACAAACACCCCAGAAGGGATGCTGCAACGCCTGCGAGAAACCG
ATCGTCGGACAGGTCATCACAGCGCTGGGACGCACGTGGCATCCCGAGCACTTCACGTGT
GCTCATTGTAACCAAGAGCTCGGCACCAGGAACTTCTTCGAGCGCGACGGCCACCCGTAC
TGCGAGCCCGACTACCACAACCTGTTCTCACCGAGATGCGCCTACTGCAACGGACCGATC
CTGGACAAATGCGTGACGGCGCTGGAGAAGACCTGGCACACGGAGCACTTCTTCTGCGCT
CAGTGCGGCCAGCAGTTCGGGGAAGAAGGATTCCACGAGAGGGACGGGAAACCGTACTGT
AGGGCCGATTACTTCGACATGTTCGCGCCGAAGTGCGGCGGCTGCAACAAGCCGATCATG
GAGAACTACATCTCCGCCCTGAACACACAGTGGCATCCTGACTGCTTCGTCTGCAAGGAT
TGTCAGATGGCTGTTAAGGGAAAAACCTTCTATGCGATGGAGGGTAAGCCGGTATGCCCG
AAATGCGTCGGAGTAGACGGCGAGGAAGACGAATGA
Protein sequence:
MLERGYPRGSWHCGRDPGSVKGLRVWAFDALLADLQNSINPGRVSSPGRTTSPGGRTVSP
GRTGSPLGRGSSPGSLSSPTSTGYGSINGSRNISSDYAKPASPTYQNTTSVHEKKFTNFT
NSPAYTPQANSHSHSQSHNGYSRTNGATSPSSRPTVDSLLDQLSTDVTNGRSSVSPIPSG
TLPRPGTKQVTVTVQETVVEPAQAPPPQATTVRHHHASSATKELDDLMASLSDFKVSGGA
GPGEQGTHVYRERKAWEEHYRSPQPEAASLEHMLGSLRADMSRQGVQTPQKGCCNACEKP
IVGQVITALGRTWHPEHFTCAHCNQELGTRNFFERDGHPYCEPDYHNLFSPRCAYCNGPI
LDKCVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFDMFAPKCGGCNKPIM
ENYISALNTQWHPDCFVCKDCQMAVKGKTFYAMEGKPVCPKCVGVDGEEDE