| Genomic Position | scaffold128:- 200052-217281 |
|---|---|
| See gene structure | |
| CDS Length | 690 |
| Paired RNAseq reads | 135 |
| Single RNAseq reads | 1070 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011339 (3e-21) |
| Best Drosophila hit | tomosyn, isoform G (5e-74) |
| Best Human hit | syntaxin-binding protein 5-like (2e-63) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC001102 [Tribolium castaneum] (2e-79) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC001102 [Tribolium castaneum] (3e-76) |
| GeneOntology terms | GO:0017075 syntaxin-1 binding GO:0007269 neurotransmitter secretion GO:0016082 synaptic vesicle priming GO:0008021 synaptic vesicle GO:0016079 synaptic vesicle exocytosis GO:0007163 establishment or maintenance of cell polarity GO:0016021 integral to membrane GO:0016192 vesicle-mediated transport |
| InterPro families | IPR011046 WD40 repeat-like-containing domain IPR015943 WD40/YVTN repeat-like-containing domain |
| Orthology group | MCL40624 |
Nucleotide sequence:
ATGCAGTTTGTGACTGTTTATCTTGCTATACGCAATATATTTAAGTGTTACATCAGTGTT
GTAAGACCTTTAATATATTCATCGTCAAACTTTCTTTCGTTTCAGACGTTTCGTCATGGT
TTCCCATTCGCCCCCACGGCACTCGCCTGGGACCCGATACAGAAGCTCCTAGCCATCGGA
GACAAAAGTGGAAATCTAAGAATTCTCGGTGGCCCTGGAGTGGATGCACATGTCCGCCAC
GAGTCCGGGGAGGCCGTGCTGCACGCCAAGTTCGTCATCAACGAAGGCGCCCTCGTCACG
GCCACCGCAGACGACCAGCTCAACCTCTGGACCTTCCGGCAGAAGTTCCCGCAGAGGGTG
CAGGCGCTCAAGTTCCAGAGAGAACGGATCACGTGTCTCCACCTGCCTCTTCAGTCCAAA
TGGATCCACGTGGGCACGGAGCGGGGGAACGTCCACGTCGTCAACATAGAGACCTTCGCG
CTCAGCGGCTACGTCATCAACTGGAACAAGGCTATAGAAGTAACAAGAGCAGTCCACCCT
GGTGCTGTTGTGGACTTGAGTGAAAACCCTATTGATGCGAGCAAGCTAGTGATAGCATTT
GAGACCGGCTTGGTGGTTGTGTGGGATCTGCGAGCGCGCGCCGCCGAGTGGCGAGGCTCG
CTCGTCGCTCGGCACCGGCGGGCCAGGTGA
Protein sequence:
MQFVTVYLAIRNIFKCYISVVRPLIYSSSNFLSFQTFRHGFPFAPTALAWDPIQKLLAIG
DKSGNLRILGGPGVDAHVRHESGEAVLHAKFVINEGALVTATADDQLNLWTFRQKFPQRV
QALKFQRERITCLHLPLQSKWIHVGTERGNVHVVNIETFALSGYVINWNKAIEVTRAVHP
GAVVDLSENPIDASKLVIAFETGLVVVWDLRARAAEWRGSLVARHRRAR