New model in OGS2.0 | DPOGS209956  |
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Genomic Position | scaffold128:- 126930-128500 |
See gene structure | |
CDS Length | 468 |
Paired RNAseq reads   | 9361 |
Single RNAseq reads   | 50034 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011273 (1e-57) |
Best Drosophila hit   | ribosomal protein S27A (7e-60) |
Best Human hit | ubiquitin-40S ribosomal protein S27a precursor (1e-54) |
Best NR hit (blastp)   | RecName: Full=Ubiquitin-40S ribosomal protein S27a; Contains: RecName: Full=Ubiquitin; Contains: RecName: Full=40S ribosomal protein S27a; Flags: Precursor (1e-84) |
Best NR hit (blastx)   | RecName: Full=Ubiquitin-40S ribosomal protein S27a; Contains: RecName: Full=Ubiquitin; Contains: RecName: Full=40S ribosomal protein S27a; Flags: Precursor (2e-67) |
GeneOntology terms    | GO:0005622 intracellular GO:0005840 ribosome GO:0003735 structural constituent of ribosome GO:0006412 translation |
InterPro families    | IPR019954 Ubiquitin conserved site IPR019956 Ubiquitin subgroup IPR000626 Ubiquitin IPR002906 Ribosomal protein S27a IPR019955 Ubiquitin supergroup |
Orthology group | MCL13177 |
Nucleotide sequence:
ATGCAGATTTTCGTGAAAACCCTCACGGGGAAAACCATCACCCTCGAGGTCGAACCCTCG
GACACCATCGAGAATGTCAAAGCTAAAATACAAGACAAAGAGGGAATCCCTCCGGACCAG
CAGAGATTGATCTTCGCCGGTAAACAGTTGGAGGACGGTCGGACCCTCTCAGACTACAAC
ATACAGAAAGAATCCACACTGCACCTGGTGCTGCGGCTCAGAGGAGGAGCCAAGAAACGC
AAGAAGAAGAACTACTCCACACCCAAGAAGATCAAGCACAAGAAGAAGAAGGTCAAGCTA
GCAGTACTCAGGTTCTATAAGGTGGACGAGAACGGCAAGATCCACCGTCTGCGGCGCGAG
TGCACGGGCGAGCAGTGCGGCGCCGGAGTGTTCATGGCCGTGATGGACGACAGGCACTAC
TGCGGCAAGTGTCACTCCACCATGGTGTTCAAGGATGACGAGAAGTAG
Protein sequence:
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKNYSTPKKIKHKKKKVKLAVLRFYKVDENGKIHRLRRE
CTGEQCGAGVFMAVMDDRHYCGKCHSTMVFKDDEK