| New model in OGS2.0 | DPOGS209971 |
|---|---|
| Genomic Position | scaffold128:+ 81591-96828 |
| See gene structure | |
| CDS Length | 3441 |
| Paired RNAseq reads | 2336 |
| Single RNAseq reads | 5746 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011331 (4e-137) |
| Best Drosophila hit | Liprin-alpha, isoform A (2e-152) |
| Best Human hit | liprin-alpha-1 isoform b (2e-116) |
| Best NR hit (blastp) | Liprin-alpha, putative [Pediculus humanus corporis] (0.0) |
| Best NR hit (blastx) | Liprin-alpha, putative [Pediculus humanus corporis] (0.0) |
| GeneOntology terms | GO:0008594 photoreceptor cell morphogenesis GO:0045202 synapse GO:0007416 synapse assembly GO:0048490 anterograde synaptic vesicle transport GO:0045467 R7 cell development GO:0031290 retinal ganglion cell axon guidance GO:0007412 axon target recognition GO:0007411 axon guidance GO:0048841 regulation of axon extension involved in axon guidance GO:0048676 axon extension involved in development |
| InterPro families | IPR011510 Sterile alpha motif, type 2 IPR021129 Sterile alpha motif, type 1 IPR010993 Sterile alpha motif homology IPR001660 Sterile alpha motif domain IPR013761 Sterile alpha motif-type |
| Orthology group | MCL10617 |
Nucleotide sequence:
ATGCAGCGCGGCGGGGGCGGCGCCTGCGCATTGCTGGGGGCGAAATGCACGCGCAGGAAC
GGGGAGCTCTGCACGTGCACCGTGCACACAACCCTACTGCAGGAATTCGCGACCCTCACG
AAGGAGCTCAACCAGGCCCGGGAACAGCTCCTGGAACGGGAGGAGGAAATTTCGGAACTC
AAGGCGGAAAGAAACAATACCAGATTGTTACTGGAGCACTTAGAATGTCTGGTGTCGCGG
CACGAGCGCTCTTTGCGCATGACGGTGGTGAAGCGGCAGGCCGCCGCCCAGTCTGGGGTC
TCCTCGGAAGTGGAGGTCCTGAAGGCCCTCAAGAGTCTCTTCGAACACCACAAGGCCTTA
GACGAGAAGGTTCGAGAAAGATTAAGAGTGGCGCTAGAGAGGAACACGGCTCTGGAAGAG
GAGTTGGCTCTGACCAAAGAAGAGTTGCAGCAATATAAATCATCCGGTGCCCAGGAAGGC
GACAAGCCCAAGGAGAATGGCACCACCGCCACCGGCTCGCCCGAACAGAACGGGGAACCC
CCCAAGGAACAAAGTAGTGTTAACGGCGAAACGGACGTCAAGAAGCTCACTGAACTACAA
AACACTATCGCCAAACAGTCGGCGGAACTGAGCTCGTGGCAGAGACGGGTCGCCGAGCTG
AACAACAAGGTCACGGAACTGGAGGAGAGGTTGAGTAAGGGGGAGAAGGAGTTGGTCAAG
AAGCAGGAGGAGTGCGCGAAGCTACAGAGGGACCTGAGGGAGAACGTGGCTCAGAAGGAG
GATCAGGAGGAACGCATAGCCACATTGGAGAAACGATATCTTAACGCTCAGAGAGAGTCC
ACCTCCTTACACGACCTGAATGAGAAGCTGGAACAGGAGTTGCAGCATAAGCAGGCACAG
CTTAAGCTCCAAGAAGAGAAGATAGCGGCCATAGAGGAGAAGCTGGAACTGTCCACGCAG
AAGTTGGCGCAGATGTCCTCGCTGCCGGAGATGGAGGAACAGCTCAAGGCGAGGATGGAG
GCCCTCAGCCAGGCGCAGGAGAGGCACGGCTCGGCCGAGGACCGCATCCAGAGGCTGGAG
GCGAGTGTGGAGGAGAAGAACGCCGAGCTCATGAGACTCAACCAGCGGCTGCGGATGAAC
GAGGAACACAACACCAGGCTCTCCGCCACCGTGGACAAGCTGCTGTCCGAGTCTAACGAT
AGGTTGCAGGTCCACCTGAAAGAGCGGATGCACGCTCTGGACGAGAAGAATGCCCTCACC
CAGGAGTTGGAGAAAACGAGAAAGTACGCTGATGAACTGTTACAAGAAAAGGCGGACATA
CTCAAGGAGCTGGCCAAGTGGAGGATGGAGACGGAACAGTTGAAGCGCCAGATGTTGCAG
GCGGAGATAGCGTTCAACATCCAGCAGACGGATGCCCTGACGAGGTCGCTGTCACCAGCT
GCCGCTCAGCCGCCCACCAACATATATGGAGCCAAGCTGGACGGGTCCTGGGAGAAGCTG
CAACAGGCGCACGTGCTGGGTCCACCCTTCGACACCAGTGACGCCGAGAACGAGGAGTCT
GAAGGTGCAGAAGGGCACACGGATGCGGCGGCGCTGGCGCTGATGCTGCAGGAACAGCTG
GACGCCATCAACACGGAGATCAGACTCATACAGGAGGAGAAGCAGAGCACTGAGGCGCGA
GCCGAGGAGCTGGAGTCCAGGGTCGGCAGTTACGAGCACATGAACGTAGTGTCTCGGCGG
GCGGAGTCCCCGCCGCCGGCAGCCTCGCCCTCCAGACCGAACCATCACAAGTACCACACT
GCGCCGGCGTCCATGTCTCCGGCTCACGCTCACTTCCGGCCGCCGGCCTCCGAGAGCCTG
CCCTCCAGCCAGGTCGGTCCACCCCCCACCCACGCCCCACCAATCCACTCACATATCAAC
TCACCCTGTACTAAGCGTTCACCCCTTGTATACAAATCGCTAGTCGCTCGGAGCAGTCGT
AACAGCTTTCATAGTATAGGGCATTTGCGATTCGCTTTCTCTTGTCCATATTTACCAGAT
CGCTGGGGAGGTTTGCAGCCCCTTGTTCTCCTCGCTCCAAGCTTGACTGTGTCTGATCCC
GGTGCTAGGAGTAGTTCCAACCTTCCCCCCCACCCCGCTTCCAGTATCGCCTTACGTCCG
AGCACACACGACTGTGATGTATATAGGGTGTTCCCCCAGTTGCAGCTGTGCGGGGAGGGA
GACGAGCGTGCTGGGCGTCTGGAGCGGGCCATGCATCCCGACAGGGAGAGACTCCGCCCT
CCACACCACTACGACTCCTCGAGCCAAGAGTCTCTGGGTGCGGGCGCGTGGGGAGGATCT
CCACTCCCGCGAGGAGTGGCTTCAGCATCAGCCGTCTCTATAGCATCGATGCACCAACAG
AAGAAGAGAGGAATCAAAAGCTCGTTGGGACGGTTCTTCAGTAAGAAGGAGAAAGCTGGC
ATGCCGATGCAGCAGGGTCAGAGTCCTCGGTCGTTGTCGTCCGCCTCCTCTCTAGGTCTG
TCCTCGTTGGCTGATGAAGGTGAACCCTCGCATCCTCCCACACACCAGCACCCGGACTAC
GCTCGCACTAAAACTAAAGAGCGCGACTATCGCCATGAACTCCTGGGCGAGGCGATGAGA
GCGGGGACGCCCTTCGCGCTCTGGAACGGTCCCACGGTAGTGGCTTGGCTGGAGCTCTGG
GTGGGGATGCCGGCCTGGTACGTTGCGGCCTGCAGGGCCAACGTCAAGTCGGGCGCCATC
ATGTCCGCGCTGTCCGACCAGGAGATACAGCGGGAGATAGGCATCAGCAACCCTCTCCAC
CGGCTGAAGCTGCGCCTGGCCATACAGGAGATGGTATCATTGACCTCACCATCAGCCCCG
CGAGGTACCGCTTGTGCCGCGCTGGCGTTCGGGGACATGAACCACGAGTGGATCGGCAAC
TCGTGGCTGCCGTCGCTCGGCCTGCCGCAGTACAGGACCACCTTCATGGAGTGCCTGGTG
GACGCACGAATGCTGGAACACCTCACCAAGAGAGACCTGCGGACGCAGCTCAAGATGGTT
GACAGTTTCCACAGAACTTCGCTTCACTTCGGCGTGGCATGTCTGAAGAGGGTCGGCTAC
TCCGTGAGGGCGCTGGAGGAACGTCGTCGGGCAGCGGAAATAGGGCTCCGGGACGTGCTC
GTGTGGACCAACGAACGTCTCCAAAGGTGGCTGCTCTCCATCAACCTGAAGGAATACGCC
AACAATCTGTCGGAGTCTGGAGTGCACGGAGCGTTGATAGCGCTCGACGACAACTTCGAC
GCGAACAGTATGGCGCTCGCGCTACAGATACCGACCCAGAACACGCAGGCGCGCCAGATC
CTCGAAATGGAGTTCAACAACCTGCTGAGTACAGGCACGGAGCGTACGCGCGCACCTCAC
GACCACGCGCCGGCCTCCTGA
Protein sequence:
MQRGGGGACALLGAKCTRRNGELCTCTVHTTLLQEFATLTKELNQAREQLLEREEEISEL
KAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAAAQSGVSSEVEVLKALKSLFEHHKAL
DEKVRERLRVALERNTALEEELALTKEELQQYKSSGAQEGDKPKENGTTATGSPEQNGEP
PKEQSSVNGETDVKKLTELQNTIAKQSAELSSWQRRVAELNNKVTELEERLSKGEKELVK
KQEECAKLQRDLRENVAQKEDQEERIATLEKRYLNAQRESTSLHDLNEKLEQELQHKQAQ
LKLQEEKIAAIEEKLELSTQKLAQMSSLPEMEEQLKARMEALSQAQERHGSAEDRIQRLE
ASVEEKNAELMRLNQRLRMNEEHNTRLSATVDKLLSESNDRLQVHLKERMHALDEKNALT
QELEKTRKYADELLQEKADILKELAKWRMETEQLKRQMLQAEIAFNIQQTDALTRSLSPA
AAQPPTNIYGAKLDGSWEKLQQAHVLGPPFDTSDAENEESEGAEGHTDAAALALMLQEQL
DAINTEIRLIQEEKQSTEARAEELESRVGSYEHMNVVSRRAESPPPAASPSRPNHHKYHT
APASMSPAHAHFRPPASESLPSSQVGPPPTHAPPIHSHINSPCTKRSPLVYKSLVARSSR
NSFHSIGHLRFAFSCPYLPDRWGGLQPLVLLAPSLTVSDPGARSSSNLPPHPASSIALRP
STHDCDVYRVFPQLQLCGEGDERAGRLERAMHPDRERLRPPHHYDSSSQESLGAGAWGGS
PLPRGVASASAVSIASMHQQKKRGIKSSLGRFFSKKEKAGMPMQQGQSPRSLSSASSLGL
SSLADEGEPSHPPTHQHPDYARTKTKERDYRHELLGEAMRAGTPFALWNGPTVVAWLELW
VGMPAWYVAACRANVKSGAIMSALSDQEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAP
RGTACAALAFGDMNHEWIGNSWLPSLGLPQYRTTFMECLVDARMLEHLTKRDLRTQLKMV
DSFHRTSLHFGVACLKRVGYSVRALEERRRAAEIGLRDVLVWTNERLQRWLLSINLKEYA
NNLSESGVHGALIALDDNFDANSMALALQIPTQNTQARQILEMEFNNLLSTGTERTRAPH
DHAPAS