| New model in OGS2.0 | DPOGS209972 |
|---|---|
| Genomic Position | scaffold128:+ 103182-124851 |
| See gene structure | |
| CDS Length | 2079 |
| Paired RNAseq reads | 1318 |
| Single RNAseq reads | 3641 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011332 (5e-153) |
| Best Drosophila hit | CG34394, isoform D (2e-59) |
| Best Human hit | GRAM domain-containing protein 1B (2e-81) |
| Best NR hit (blastp) | PREDICTED: similar to CG3304-PA, isoform A [Apis mellifera] (1e-123) |
| Best NR hit (blastx) | PREDICTED: similar to CG3304-PA, isoform A [Apis mellifera] (7e-111) |
| GeneOntology terms | GO:0016020 membrane GO:0016021 integral to membrane |
| InterPro families | IPR004182 GRAM |
| Orthology group | MCL14468 |
Nucleotide sequence:
ATGACCACTTGGAAAACAGAATTGGAGAACCGTAACATCGCTGTTTCCATGAGAAAGTCT
GTGGAGAATCTAGTGATATCGTCACAAGATGCTATCGGACAGAGCATCAGTCAGGCTCTC
AGCTTCTCCGGAGTGGTCACCAATGCAACGGCCACACTACAGGAAAATAAAAATGTGTCT
CGCTCACCCTCCCCGTCCCTGCGGCATGCGGAGAGTTCCCTGGACTTTGTGGACAATGAC
AGAAAGAGTGACGTGAGCGACACGTCCCAGGTGCCGTCCGTGGCGGGGGACGTGGCGCTC
GGTCTAGACGCAGCCAGTCTCCTGATTAAGGATGTCAAGGCGGCCTCGCCCAGCTCCAGA
GGTGATCAAGTGAGGTCCAAGAAGAAGAGCTGGTACAACTCGCTGTACCCCACATACAAG
AGCAAGTGTGACGATTTCAAGAGACTCTTCAAGGAACTGCCGGATGATGAGAGACTTATA
GTCGACTACTCGTGCGCCCTCCAGTGCGACATCCTGGTGCACGGTCGCCTGTATGCCTCT
CAGCGGCACCTGTGCTTCCACGCCAACATCTTCGGCTGGGAGAAGGTCCTGATGCTGAGG
TGGACAGACGTCACCGCCATCACCAAGGAGAAAACAGCCAGGGTCATACCCAACGCGATC
CTGATCTGCACGGAGACCGAGAAGAACTTCCTGGCGTCCTTCACGGGCCGGGACAAGGCC
TACCTGATGCTGTTCAGGATCTGGCAGAACGCGCTCATGGACCAGCCCATGTCCAGCCAC
GAGATACTGCAGCTGGTGCACGCGTGCTACGGAGCCGAGCTGGGGTTCGACTCGGACGAG
GACGCTCACGACGCCCAGGACCCGCAGGACCCGAACGAGCAGAACGTCGACGTGTCCGAG
GAGGCCGTGGACTCCTCGTCCATGGAGGCGGCGGAGACGAGAGCGACGCCCTATCAGACC
GTGACTAATGGTAACGCGGAGTTCCGCGAGGAGGCCGGGGACGTGCTGCCCACCGACATG
TCCGACAGCAGCGACAGCGAGCCCGAGAAACACAACAGTAACGGTGAGGATGAGAAGTGC
ACGTCCTCCCACGAGGGCAAGCTGCTGCTGCAGCAGGAGTTCCCCATCAACATCGACCAG
CTGTTCACGATGATCTTCACCAACTCCAAGTTCAACCTGGAACTGCTGGCGGCCAGGGAC
ACCTCCGACTATGTCCAGAACCCCTGGCAGCCTCAGAACGGCCTGAAGTGTCGTCAAGTG
AGTTACACCCTGGGACTGACCTCGGGACCCATGGGACCCAAGGAGGTGCAAGTGACGGAG
ACACAGGTGATGAACAGGTGCAGTAAGCCGGGAGTGCTGTACTCCATCGACTGCAGCAAC
GAGAACGCCGGCATTCCGTACGCGGACTACTTCAGCGTGGAGGCGCACTACTGTCTGAGG
AGGAGAGGGGACCGCACCGCGCTGGAGCTGTACGGATACGTCAACTACAAGAAGACCATG
TGGCCGCTCATCAAGGCCTTCCTGGAGAAAAACGCCATGTCCGGCATAGAGGAATTCGCC
CGCTTGTTGGAGAGCCGCCTCATGGCCGCCGCCCGGCCCGTGCGCCCCGCCCGCCCGCCG
CCCGCCCTACAGGCGCGGTCACGACGACGCAGGAGAGGAGACGTGACTCCGCTGGGAACG
TTATCTGCGGCGACGACCCTGCCGGCAGGGGGGTCCGCAGCCGCCAGCGGAGCCCCCGCG
GGCCGCGCGGGGACCTGGCTCACGGCCGCCCTGCTGGTGCTGCTGGCCCTCAACGCTCTG
CTGTACTGGAGGCTGTACCACGCGGAGAGGAGGATCGACCTGGAACACTTACACACCAGG
ATGAACACTCTTAGTGAGTCTCAGGCGGCGTCGTGGGCGCGCGCCCTGGAGTCCCACTCG
GCGCGGCAGAGAGGTCAGCTGATGGCGTGGCGCTCCGCCCTCGACCGGACCGTCACGCAT
CTCCTGCAGACCGAGCAGGCTCTCAAGTCGTTGTTGGAGACGATCAAGCCCGCGCTCGAG
AAGGCGGACGGAGACACGGAACCCCGGGACGAGCTGTGA
Protein sequence:
MTTWKTELENRNIAVSMRKSVENLVISSQDAIGQSISQALSFSGVVTNATATLQENKNVS
RSPSPSLRHAESSLDFVDNDRKSDVSDTSQVPSVAGDVALGLDAASLLIKDVKAASPSSR
GDQVRSKKKSWYNSLYPTYKSKCDDFKRLFKELPDDERLIVDYSCALQCDILVHGRLYAS
QRHLCFHANIFGWEKVLMLRWTDVTAITKEKTARVIPNAILICTETEKNFLASFTGRDKA
YLMLFRIWQNALMDQPMSSHEILQLVHACYGAELGFDSDEDAHDAQDPQDPNEQNVDVSE
EAVDSSSMEAAETRATPYQTVTNGNAEFREEAGDVLPTDMSDSSDSEPEKHNSNGEDEKC
TSSHEGKLLLQQEFPINIDQLFTMIFTNSKFNLELLAARDTSDYVQNPWQPQNGLKCRQV
SYTLGLTSGPMGPKEVQVTETQVMNRCSKPGVLYSIDCSNENAGIPYADYFSVEAHYCLR
RRGDRTALELYGYVNYKKTMWPLIKAFLEKNAMSGIEEFARLLESRLMAAARPVRPARPP
PALQARSRRRRRGDVTPLGTLSAATTLPAGGSAAASGAPAGRAGTWLTAALLVLLALNAL
LYWRLYHAERRIDLEHLHTRMNTLSESQAASWARALESHSARQRGQLMAWRSALDRTVTH
LLQTEQALKSLLETIKPALEKADGDTEPRDEL