| New model in OGS2.0 | DPOGS209988 |
|---|---|
| Genomic Position | scaffold128:+ 329111-336401 |
| See gene structure | |
| CDS Length | 6216 |
| Paired RNAseq reads | 9858 |
| Single RNAseq reads | 22890 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011343 (4e-27) |
| Best Drosophila hit | CG2926 (4e-37) |
| Best Human hit | PHD and RING finger domain-containing protein 1 (5e-38) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC005009 [Tribolium castaneum] (3e-68) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC005009 [Tribolium castaneum] (6e-50) |
| GeneOntology terms | GO:0070063 RNA polymerase binding GO:0046872 metal ion binding GO:0019904 protein domain specific binding GO:0008270 zinc ion binding GO:0005634 nucleus GO:0006366 transcription from RNA polymerase II promoter GO:0006397 mRNA processing |
| InterPro families | IPR001841 Zinc finger, RING-type IPR001965 Zinc finger, PHD-type IPR019787 Zinc finger, PHD-finger IPR013083 Zinc finger, RING/FYVE/PHD-type IPR017907 Zinc finger, RING-type, conserved site IPR019786 Zinc finger, PHD-type, conserved site IPR011011 Zinc finger, FYVE/PHD-type |
| Orthology group | MCL40625 |
Nucleotide sequence:
ATGAGTGAGGAAGGTGGTGATGAGTCGCCGGCTTGGCTGAAACGAAAGATTAAGCAAGTC
GTGGTGCTCTCGGCAACATCAGATTCTGATAGCGACGAGAGCGTTGGCGTGGCGGGGACA
CGTAGAAAAAGATTGAGGGTCATCAGCGATGAGGAGGCAAGTGATAGCAGCGGAAGCTCC
GTCGTTTGCGCGGGCAGTCGGCGGAGGCGCATACTTCCGAAGCTACGAGACTCGGACGCT
GAAAGTGATAGCTCCGATTGGACAACAGATCGTTCACCTCCCGGAAAAGACAATGTTGCC
ACAAATAAAACAAACTCCGGTTTCGCATCCGATAGCTCAGAAGGAAATTCTGACAAGTGT
TCAATCTGTTTAATGCGCTTTACAAATCAAGAGATTGGCACTCCAGAGATCTGTGAACAC
ATTTTCTGTTTGGATTGTATCACAGAATGGTCCAAAAACGTAAACACCTGTCCTGTAGAT
AGGCTAACATTTAATTCTATAATAGTGCGAACATGTATCGGAGGGAGGGTACTGCGAACT
GAGGCGGTCCGGACAGTGCAACGGAGCTCCTCTGTTGAAGCACTTGTTGTGGAAGACCCT
ACTATATGTGAAATTTGTAGAAGCATGGAGAGTGAGGAGACAATGCTGCTGTGTGATGGC
TGTGATCTTGGCTTCCATATGCACTGTTTAAATCCCCCTCTGTCAGAGGTGCCAGCAGAT
CAATGGCTGTGTCCAAACTGTTTTGTTGATATTGATAATGACCAGGAGTTGATGGATGCA
ATCAACTTGTCTGAAGTGGAAGACTTGTTTGATGGTATTATTGAGTTCGACCTGCCGGTG
GGGCCGAGGCCTACACCCTTGAGGCAGCCAAGAAATGTGAGAAGGTCAGCAAGGAATGTA
AGATCAGTCGAAGAACCTTCAACTTCCAGTAGCAACCACACTAACAATGGAAATGAACAG
CCAACAACCTCACAGGGGACCAGAAGTACACTGAGAACAACATCTCGGTCCATCAACAGA
AGACGAACGACGACCCGCAGACGGAAATACAAAAGAAGACGAACCAAAACTGTCATTATA
GAGTATGAAGTACAAGAAAATGGTAAATTCCCCATCACAAGAAAAATCAAAAGGAGGGTT
AAAAAGAGAAGGGTAAAAAAACGTCAACCTCGAACTGCGGCTCGAAGGTCCTATGTTCGT
GCGAGCGTCCAGGCCAAGCTCGCGTCACAGCGAAGTCAGAGACAGGAAGTGTCGGCGGTG
ACACGCACAGGCCGCGGGGTCAAGGACCTCACAGTCAATAGGCACAGAGCCAGTATACCG
TCGCTGAGTCTCTTGGGCAATCCCAATGAACTCGAATATTTCTCTGATGAGGACAATACC
GTCTCGGAGGACGCCTCCACCGCCGTCGCAGTGAGACCCTCCTCCAATATCTTCAGTGCT
TACAGACAGGCGAGAAGGAAAATCGTTTCGGTTCCGTCTCCCCCGCACGCCTCCTCGGCG
CCGGACCTTCTGTCTAACATTTTGGAGAGTCAGACTTTATTGCATTCGAAGAATTCTTTA
GTTTCGATAACAGTAGACGGGAACATCAATATAAAGCTGCAGACGCAGAAACAGAGCCAG
CAGAAGAAGACCGTCACAGAAACGAAAGAAGACGAGAAAGTGGATTTGTCCAAGGCCAAA
GAAGCTGTGAAATGTGCGCCATCCTACCCGGGGCAAGGTCGCGGCGGCGGAGGCTGGGGC
GGGGGGTACCGGGGCGGCTACGGGAGAGATCAGCATCACGCCAACGGAGGGTTCAACCGC
GGAGGGTACGACTCCGGCTACGGAGCCGGCTACCAAGGTCGGCCCGCGGGATACGGCGGC
TACCAGAACAGCGGCATGCGGCGAGACGACCCGGACTACTATGACCCCTTCCCCCGCAGG
CCGCAACAATTCACCAATGCCGATGATTGCTACTACGACCGATCTCGTAGGCTGGGGATG
GACAACGGACGAGGCGGCTTTGTGAACCATCATCGAAATGACGGCGGCCGATACAGTGGC
GCTCCCGGCTGGCCCTCCGCGGGCGCCCCGGCCGGGCCCTCCGCCGCCGGCCCGCCGCCG
CACGCTAGACACTCGTTCGGAGGTTTTGAAAATCCTGTCGACATGAGGATGACCGACAGA
CAGATGCCGCAGTCGAATCCTACCGTCGATATGTTTTCTGGCATCGTTCCGCACCAGGAC
AAACCTCAACCGCCCCCCTACCGACCGCAGACGGACCCGTCCGCTTTTCGCCCTTCTCCG
GAGCCGCATCCCTATCAATCACCGTCACAGCAACAGAGTTTCGTTTATCCGAAAGCATCG
GAAGTGGAGAAATCAGAGGACGAGAGAAGCGATCCCGGCCTGATCATCGACACTGAGAAG
TACGACCCCACCGAACCCACACACGACGAGGACAGCGGGGAGGAAGACAAGACGGCACCC
GCTCCACCTGCCCCGCCCTCGCCTCAGCACAACTCTTACGAGCCAGAGTCGACGGCCGAT
GAGAGTGTGCAGAACATACTGGCCGGCATCGACGCAGGCACCATGAATGTGCCGCCGAGC
GTCCTGGACAGCGCGGTCCGCCAGGTGCTCAAGGAACACCGGAACCTCATCTCGTCTCCT
GGAATGAAGACAAACCGAGACGGAAGCGAGGACGAGTCGGATGGCGACTGTCCCAATTTT
TCAATTTATTCAGCCGCAAGTGTTCACATAGCGAACTACGTCAACGACCTTCCCGACGAG
CCGCCGGCGGAGCCCCGGCCGACAGAGGGTCTCGAAGACCTCGTGCAGGAGGACGACGAC
ACGCCGCCCGACACCTCGCCCGTTGAGACCAAGGAGGCTGAAGACAAGAAAATAGAGGTG
TCTCGGCCACATGCCAGCAAGCCGCTTTATGGTATCACTGAATCCAATGAAAAGAGGAAG
TCCGAAGAAGAATATAAAGAAAAAGTATCCAAACGATGTCCGATCACTACAAATACTAGA
AATCCTATAAAAATAAAACTTAATACGCCATCCTTGATAAAGAGACAGGTGAGCTTATAT
GACGAAGAAGACACGAGCATGGATGCCGGTCTGGAAGAGAAGTTAGACGTGAACCCTAAA
ATTAATGAAAACAAATTAAATGCAAAACATGATAGTCCTAAGAAAGAGCATCTCGATACA
GCAGCTGCGAGGAATAAAGAAGCTGCATTGAACGAAGATGACTCACAATCAAGTGGACGA
GTCCAAGAATTAAAGCAGAGTTCTAAACGTAAAAGTTTCGAAGAAACTATTAGTACGCCT
TCAAAAGAGATTAAAGAGAACGACGGATCACGGAATACAAACAAAGAAAGAAAACAGAGC
CCTTCGAAAAGTAGCAAGGAGAGCAATGATAATAATATTGATGAGGTCACAAAAAATTGT
GAGGATACTTCAGGTAGCGACATAAAGAGAGACTATAGAGTTGAACATTTGGCAGACATA
GATCCTGACAAAGACACTAGAATAAGTAATGAAAACGATCATAAAGTTGACGACAATGTG
GAAAAAATGACTGAGTCTATAAGCGAGACGGAGGACGAACGCAGCTACACACCATGTCTA
GATGAAAATAAATCTAACAAAGACGCCTCTTTCGACAACGAGAGAGACAAGGGACTAGAG
GGACTCGATACCGAAATGATATCGGAAGACGAGGGCAACGAGATGTTCTCGGAGAACGAA
CGAGCGCCCTCCAACGGATCAAGAGCCTCGCCTGTTAGGCTGAGGGTTGAGGAGGGGCAG
GTACACGAAAAGAAAGAGGTCATCAAGAAGATCACTGCGCGCGATGAAAACGTCAAGAAG
AAGAAGAAGAAGGACTCAAAGAAAGAAAATAAAGAAAAGGACAAAGGAAAAAACAAAAAG
AAAACAGAAATAACATTCAAGAAACTTAGTAAAAGTGGCAAAGAGAGAAATTACAGAGAG
AGAGATAGAGATAAAGGAGAAAAGAAGTCGGGAAGAGATCGGCGGGACTCCGGAGACAAC
GACGTGCGACAACGACGGCGGAAGGAGAAACGGAAAGACTTGCAGAGATACGACGTGCGC
TCGCTCGTTACTGAGAAGAGACGGAAGCTCAAGGATCCTTTCGGACGAGATGTGTCGCCG
AGGGAGCGCTCGCCCTCGCTGTCTCCGCCGGAGCGGTCGCCTTCACCCCCCGGCCGAAGA
GATCCATCTCCTCGACGCACACCCACACGTCTTCGTCGAGATCCCTCACCCATCCCCGCC
TCACGCTCGCGTCGCTCACCCTCGAGAATTCGGCGTTCTCACTCCCGAATCCGCAGATCA
TCGTCCAAAACTCGTCGATCGCATTCGCGTCCTCGTAGATCATTCTCCAGGGGTCGAAAG
TCACCTTCGAGACCCCGGGCTTCACCTTTGCGGTTGAAGCGCTCCGTGTCCAGAGGACGA
CGTTCGCCGAGCGCAGCACGCCAGGCGACCTCGAGAAGTCGGAGATCACCTAACCTCCGA
AAGTCCCCTTCGCGACGCAATAGCGTCCGCGGACGTACCGCTTCCCGTGGACGAACGTCC
CCAGGCCGTGGTCGCCGCTCTGTCGCCCGACGCTCCCCCAGCCCACGTGTCGGTTCCCGC
CGCAGCCCCGCGCGCAGCCCCATGCGTCGCAAGCGACGACGATCTAGCTCCCGACCGGCC
CGCCGACGGTCCGCAACCGGGAGTCCGCCCCGACGTACCCTCAAAAAGAAGAAGCGAGAA
AGATCGACTCGTCGCGTCCCGGCGGCCGCTTCCCCTGAGCGAAAACGACGACGCAGCGAG
AGCGCTCGGCCGGCGCCGGCGCCTCCATCCCCGGCGTCCCGCCCACCCTCTCCTCGCACG
CCTTCGCCAGAACCCGCGCCGTCGCCTCTCGCGCTCGAAGAAGTCCCGGAACGTCTTGAA
CGAAGACGTCGAGACCCGGAGAGACACCGCAGGAGACTCCGGGACGCGCCCGGACCTTCC
AAGGAAGTGTTCACATCCGGCGACAACATCCTTGTGAGCGTCAGTTTTAAAGAGCAGGAA
CGCGGCGAAGAGAGCGAGCGGCGAAGGCGGAGAGAGACGCGGCGTGAGAGGAGGCGGCGA
AGACGAGCGGCCGTCCCGCTCGAGGTGGAGGTAGCCAAGCCCGTGGCTATCATAGACCTC
GACCGCTCGCCTTTCCGGGAACTGACTCCATCGCCAAAGAACGTGATCGTCCTGAGCGAC
AGCGACCACGGCGAGCGAGAGGTGGGGGAGGAAAAGGCACCAGTGGCGGAGGTTCCCGCC
GAGGCGCCCACACTCGGTCCCAAGACGCCGCCAGAGCCCCTCGCACCCGAGCCCGCCGCC
GCCGCTCCTCCCGAACGCGAGCACACGCCGCCCGAAGAAGAGCCCCACTCGCCGGACGCG
TACGATCCCTTCGAGCCGACGCGCTCGGCCTCCGCTTCCCCGCCGGCGGCGGCGGCGGTG
GCACCCCCGTCTCCTCCCCGAGCACTCATCACGCTGGAGGCCGCGCAGCGTAGTAACCTG
TCTGCGGACGAAGTGATCGATCGCCGCCCACTGTCGCCGGTCGAGAAGGTTATGGCGCTG
TTGCAATCGACTCGTGATGAGAGCCCGGAGCCTCCGCCGGGTGTTCCGGAACAGCCACCC
GCGCCCCGCATCGTGCTTCCGTCACCGACGCGGGTTCCTCCCAAGCTGTTCCCGGGCAAG
CCGTCCCCGATCAAATCGAACCCGGTGAAGCCGATGCAGGTGTCTCGTCTGCCGCGCCCC
CCTCCCCCCGCCCTGCTGCCCGACGCGGGCTCGTCCCCGTACTCGCCGGGATCCAGCGAC
TTCGGTGAGCTGTTCGAGCCACCGGCTCGTCGCCCGCGCGCCGCTCCCAGACACGAGCGG
AAGAGAGGAAAAACGCAAGTCGACGTAAGAATAGACGACGACAACCTCATGATCCTGGAC
GAACTGCCGAGCTCTGCCGTCGCGATGCAAGTCAAGAGCAAATACCTGAAGAAGTTAAAC
CGTCAGGAGCGCGTGGTCGAGGAAGTGAAGCTGGTGCTGAAGCCGCACTACAACAAGAAG
AGAGTCACCAAGGAGGAGTACAAGGACATCCTCCGGCGCGCCGTGCCCAAGATCTGCCAC
AACAAGTCCGGCGAGATCAACCCCACCAAGATCCAGGCGCTGGTGGAGGCCTACGTCAAG
AAGTTCAGAAAAAAACACAAAATGGGAATCGTCTAG
Protein sequence:
MSEEGGDESPAWLKRKIKQVVVLSATSDSDSDESVGVAGTRRKRLRVISDEEASDSSGSS
VVCAGSRRRRILPKLRDSDAESDSSDWTTDRSPPGKDNVATNKTNSGFASDSSEGNSDKC
SICLMRFTNQEIGTPEICEHIFCLDCITEWSKNVNTCPVDRLTFNSIIVRTCIGGRVLRT
EAVRTVQRSSSVEALVVEDPTICEICRSMESEETMLLCDGCDLGFHMHCLNPPLSEVPAD
QWLCPNCFVDIDNDQELMDAINLSEVEDLFDGIIEFDLPVGPRPTPLRQPRNVRRSARNV
RSVEEPSTSSSNHTNNGNEQPTTSQGTRSTLRTTSRSINRRRTTTRRRKYKRRRTKTVII
EYEVQENGKFPITRKIKRRVKKRRVKKRQPRTAARRSYVRASVQAKLASQRSQRQEVSAV
TRTGRGVKDLTVNRHRASIPSLSLLGNPNELEYFSDEDNTVSEDASTAVAVRPSSNIFSA
YRQARRKIVSVPSPPHASSAPDLLSNILESQTLLHSKNSLVSITVDGNINIKLQTQKQSQ
QKKTVTETKEDEKVDLSKAKEAVKCAPSYPGQGRGGGGWGGGYRGGYGRDQHHANGGFNR
GGYDSGYGAGYQGRPAGYGGYQNSGMRRDDPDYYDPFPRRPQQFTNADDCYYDRSRRLGM
DNGRGGFVNHHRNDGGRYSGAPGWPSAGAPAGPSAAGPPPHARHSFGGFENPVDMRMTDR
QMPQSNPTVDMFSGIVPHQDKPQPPPYRPQTDPSAFRPSPEPHPYQSPSQQQSFVYPKAS
EVEKSEDERSDPGLIIDTEKYDPTEPTHDEDSGEEDKTAPAPPAPPSPQHNSYEPESTAD
ESVQNILAGIDAGTMNVPPSVLDSAVRQVLKEHRNLISSPGMKTNRDGSEDESDGDCPNF
SIYSAASVHIANYVNDLPDEPPAEPRPTEGLEDLVQEDDDTPPDTSPVETKEAEDKKIEV
SRPHASKPLYGITESNEKRKSEEEYKEKVSKRCPITTNTRNPIKIKLNTPSLIKRQVSLY
DEEDTSMDAGLEEKLDVNPKINENKLNAKHDSPKKEHLDTAAARNKEAALNEDDSQSSGR
VQELKQSSKRKSFEETISTPSKEIKENDGSRNTNKERKQSPSKSSKESNDNNIDEVTKNC
EDTSGSDIKRDYRVEHLADIDPDKDTRISNENDHKVDDNVEKMTESISETEDERSYTPCL
DENKSNKDASFDNERDKGLEGLDTEMISEDEGNEMFSENERAPSNGSRASPVRLRVEEGQ
VHEKKEVIKKITARDENVKKKKKKDSKKENKEKDKGKNKKKTEITFKKLSKSGKERNYRE
RDRDKGEKKSGRDRRDSGDNDVRQRRRKEKRKDLQRYDVRSLVTEKRRKLKDPFGRDVSP
RERSPSLSPPERSPSPPGRRDPSPRRTPTRLRRDPSPIPASRSRRSPSRIRRSHSRIRRS
SSKTRRSHSRPRRSFSRGRKSPSRPRASPLRLKRSVSRGRRSPSAARQATSRSRRSPNLR
KSPSRRNSVRGRTASRGRTSPGRGRRSVARRSPSPRVGSRRSPARSPMRRKRRRSSSRPA
RRRSATGSPPRRTLKKKKRERSTRRVPAAASPERKRRRSESARPAPAPPSPASRPPSPRT
PSPEPAPSPLALEEVPERLERRRRDPERHRRRLRDAPGPSKEVFTSGDNILVSVSFKEQE
RGEESERRRRRETRRERRRRRRAAVPLEVEVAKPVAIIDLDRSPFRELTPSPKNVIVLSD
SDHGEREVGEEKAPVAEVPAEAPTLGPKTPPEPLAPEPAAAAPPEREHTPPEEEPHSPDA
YDPFEPTRSASASPPAAAAVAPPSPPRALITLEAAQRSNLSADEVIDRRPLSPVEKVMAL
LQSTRDESPEPPPGVPEQPPAPRIVLPSPTRVPPKLFPGKPSPIKSNPVKPMQVSRLPRP
PPPALLPDAGSSPYSPGSSDFGELFEPPARRPRAAPRHERKRGKTQVDVRIDDDNLMILD
ELPSSAVAMQVKSKYLKKLNRQERVVEEVKLVLKPHYNKKRVTKEEYKDILRRAVPKICH
NKSGEINPTKIQALVEAYVKKFRKKHKMGIV