| New model in OGS2.0 | DPOGS202427 |
|---|---|
| Genomic Position | scaffold2346:- 10436-30358 |
| See gene structure | |
| CDS Length | 2268 |
| Paired RNAseq reads | 216 |
| Single RNAseq reads | 550 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013310 (2e-94) |
| Best Drosophila hit | kin of irre, isoform A (6e-118) |
| Best Human hit | kin of IRRE-like protein 1 precursor (3e-38) |
| Best NR hit (blastp) | PREDICTED: similar to nephrin [Tribolium castaneum] (3e-161) |
| Best NR hit (blastx) | PREDICTED: similar to nephrin [Tribolium castaneum] (9e-162) |
| GeneOntology terms | GO:0005886 plasma membrane GO:0007520 myoblast fusion GO:0016202 regulation of striated muscle tissue development GO:0005515 protein binding GO:0007523 larval visceral muscle development GO:0007157 heterophilic cell-cell adhesion GO:0007156 homophilic cell adhesion GO:0009986 cell surface GO:0005912 adherens junction GO:0007514 garland cell differentiation |
| InterPro families | IPR003599 Immunoglobulin subtype IPR003598 Immunoglobulin subtype 2 IPR007110 Immunoglobulin-like IPR013098 Immunoglobulin I-set IPR013162 CD80-like, immunoglobulin C2-set IPR013783 Immunoglobulin-like fold |
| Orthology group | MCL30983 |
Nucleotide sequence:
ATGTGTACATTTAGTTATGCAGGTGAGCCTGCAATTAGGTCACGGTACGCCCGCCTAACA
GTTCTAGTACCGCCAGAACCACCAAAAATACTGCAAGGCAATTTCTACTCTACTAACGAA
GACAGACTGATTACATTGGAATGTGTGTCCGTCGGTGGAAAACCACCTGCGGAGATCACG
TGGGTGGACAGCAACGCTGGTGTCTTAACTCAGGGTGTTACTTATACTGTGGAGCCTTTG
TCTGACGGACAAAGATTTACTGCCAGGTCTGTCATTAAAATGTCACCCAAAGAAGAGCAT
CATAACCAGACATTCATTTGTCAGGCACAAAATACAGCAGACAGGGCTTACAGAGCTGCG
AGTATTCAAATAGAGGTAAAATACGCCCCTAAAGTGAAGATTGTTATAAATTCTGACAAA
CGAATACCCGAGGGACATGACGCTGTTATAAGTTGTAAAGCGGAGGCAAATCCCAACAAC
TTGACTTACAGATGGATTATGAACGAGTCAATAGTTGGAAATGCTTCAGAGCTGAAAATT
AACAACATAACAAGAGCATACAATGGAGCCGTATTAAAATGCATAGTTTTCAACGAAGTC
GGAAAAAGCGAGGAAACTGAAGTACTTCAAATCACTTATCCGCCATCTTTCCGAAATCGC
CCGAGAGACGTGGATGCTGAAATAGGAAAACAGGTTACGTTGAACTGTGATGTAGATGGA
TACCCAGCTCCAGAGATTATATGGCTGCATTACGAAGAAGATACTAATATTCGTGTGGGT
AAAACACCAAATTTAACGCTGTTAGTGGACACGCATACAACTGGCCGATATATGTGTAAA
GCAAGTATTGAAGGATATCCGGAAATTGAGGCGGAAGCTTCAATTTTTATTAAAGGTCCA
CCTAAAATAATTTCAAACCACACACAGTTCGGGTCTCAAGGTGACACGGTTAATATTGAA
TGTGCTGCATTCGCAGTTCCTAGAATTGACTCTATTGTGTGGACGTTCGAAGGAAAAGAA
ATTGACTCATTACACGACCAGGATTACGCGTTCTTTGAAGACCTACAGGATGGAGGCATT
GTAAACTCAACGTTGATCATACGGGATAGTCAATCAAAACATTTCGGTGTTTATAAATGC
AATGTCTCAAACGATTACGGAAGCGACACGCTACAAATCGTTTTGAGGCCAAACAAAACA
TTCCCCTTGCTGTTGATATTATTCGGGGTGACGTCTGGGACAATAATGGTCGCGGCGCTT
GTGATGCTAGTAATTTTATGTCAAAGGAAACAAAGGAAGAACAAACAGACGCAAGTTACA
GAGAAACCAGACGTAACGGTCACAGCCGAGGAGCTTTTTAAAGAAAACGATAGGACTTCG
AACATTAGTGATCTAAAATTGGAACTCAGACAAGCTAACGGCAGCTGTGAAATTGATTAT
TCAAATACGGGATCAGATAGCACTCTATGCTCAAATGCTAAATTAGGCAGCGGGATACCA
TTAGCAGGTTCGGTCCCACTAACGACGATAAATCAAAATTCCTACCAGCCATATAGATAC
AGTAATGATTATACTGATCCCGCATATGCTGACTGTTATAAGGTAAATGGTTTTACGAAC
GGTTACCAGACTTATGTTCATTATGGGCACGATTACACTCCTGGTTCGCTTCGGGTACAG
TCACCAACATTAGGCAGCGACAAACTGACCCCAAATAGATCCATTAACGGCAGTCTACCA
AGAAGCGTGGACACACCGTCTTCAGCTCAGTACAATACAAGCAATGGATCTCAGAGCAAT
TCCTTACAACGATCAACGAAAAGAAACGAAAGTAACACAGCTTTGAATAATTTAGCCAAC
GACGGTCGAATGCCAAATGGCATAATTCAAGGGGTGGATGTAAGATACGCTGCTACATAC
GGCAACCCTCATCTACGCACTGGTCTCACAGTTCACACAGCAAAACCAGCGTCGACTCCG
GCTCCGCCCCCATATTCGTCTGTTAGAAACTCTGTGGTACTACCATCAGGTCCATCATTG
CATTCAATAACATCACCCACAAGTCTAACATCACCCCAATGTGCCACAAGCCCAGTAACT
AATTCTACGATGTCTACGGACAGCGCACAACCGGGCGTGACAACGTCAGCCACTCCTCAA
TCGCCTAGCTCGCATTACATACTCGCTCCTTCAAATCGAACCTTGGCCAATACAAGCGTT
ACTAAGAAAGGTAACGCCCACCAAACGCCATTAGCAACACACGTGTAG
Protein sequence:
MCTFSYAGEPAIRSRYARLTVLVPPEPPKILQGNFYSTNEDRLITLECVSVGGKPPAEIT
WVDSNAGVLTQGVTYTVEPLSDGQRFTARSVIKMSPKEEHHNQTFICQAQNTADRAYRAA
SIQIEVKYAPKVKIVINSDKRIPEGHDAVISCKAEANPNNLTYRWIMNESIVGNASELKI
NNITRAYNGAVLKCIVFNEVGKSEETEVLQITYPPSFRNRPRDVDAEIGKQVTLNCDVDG
YPAPEIIWLHYEEDTNIRVGKTPNLTLLVDTHTTGRYMCKASIEGYPEIEAEASIFIKGP
PKIISNHTQFGSQGDTVNIECAAFAVPRIDSIVWTFEGKEIDSLHDQDYAFFEDLQDGGI
VNSTLIIRDSQSKHFGVYKCNVSNDYGSDTLQIVLRPNKTFPLLLILFGVTSGTIMVAAL
VMLVILCQRKQRKNKQTQVTEKPDVTVTAEELFKENDRTSNISDLKLELRQANGSCEIDY
SNTGSDSTLCSNAKLGSGIPLAGSVPLTTINQNSYQPYRYSNDYTDPAYADCYKVNGFTN
GYQTYVHYGHDYTPGSLRVQSPTLGSDKLTPNRSINGSLPRSVDTPSSAQYNTSNGSQSN
SLQRSTKRNESNTALNNLANDGRMPNGIIQGVDVRYAATYGNPHLRTGLTVHTAKPASTP
APPPYSSVRNSVVLPSGPSLHSITSPTSLTSPQCATSPVTNSTMSTDSAQPGVTTSATPQ
SPSSHYILAPSNRTLANTSVTKKGNAHQTPLATHV