New model in OGS2.0 | DPOGS213928  |
---|---|
Genomic Position | scaffold2768:+ 16191-17553 |
See gene structure | |
CDS Length | 231 |
Paired RNAseq reads   | 0 |
Single RNAseq reads   | 561 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004573 (7e-37) |
Best Drosophila hit   | small ribonucleoprotein G, isoform B (2e-30) |
Best Human hit | small nuclear ribonucleoprotein G (4e-29) |
Best NR hit (blastp)   | small nuclear ribonucleoprotein G [Bombyx mori] (2e-35) |
Best NR hit (blastx)   | small nuclear ribonucleoprotein G [Bombyx mori] (1e-34) |
GeneOntology terms    | GO:0005634 nucleus GO:0030532 small nuclear ribonucleoprotein complex GO:0005681 spliceosomal complex GO:0000398 nuclear mRNA splicing, via spliceosome GO:0000245 spliceosome assembly GO:0007052 mitotic spindle organization GO:0071011 precatalytic spliceosome GO:0071013 catalytic step 2 spliceosome |
InterPro families    | IPR006649 Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type IPR001163 Like-Sm ribonucleoprotein (LSM) domain IPR010920 Like-Sm ribonucleoprotein (LSM)-related domain |
Orthology group | MCL12903 |
Nucleotide sequence:
ATGTCTAAGGCACATCCTCCAGAGTTGAAAAAGTTCATGGACAAGAAGCTGTCCATCAAA
CTAAATGCTGGTCGTGCTGTGACGGGCGTTCTTAGAGGTTTTGATCCTTTCATGAACTTG
GTACTTGATGAATCAGTTGAGGAATGTAAGGACGGGCAGAGGAATAATATAGGGATGGTC
GTAATCCGTGGAAACAGTATCATCATGCTGGAGTCTTTGGATAGAATATAG
Protein sequence:
MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNIGMV
VIRGNSIIMLESLDRI