| New model in OGS2.0 | DPOGS208131 |
|---|---|
| Genomic Position | scaffold1110:+ 12986-19098 |
| See gene structure | |
| CDS Length | 3174 |
| Paired RNAseq reads | 1695 |
| Single RNAseq reads | 4218 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006572 (3e-83) |
| Best Drosophila hit | Ptc-related (0.0) |
| Best Human hit | patched domain-containing protein 1 (4e-69) |
| Best NR hit (blastp) | hypothetical protein AaeL_AAEL001299 [Aedes aegypti] (0.0) |
| Best NR hit (blastx) | hypothetical protein AaeL_AAEL001299 [Aedes aegypti] (0.0) |
| GeneOntology terms | GO:0005886 plasma membrane GO:0004872 receptor activity GO:0008158 hedgehog receptor activity GO:0016021 integral to membrane |
| InterPro families | IPR000731 Sterol-sensing domain IPR003392 Patched |
| Orthology group | MCL10765 |
Nucleotide sequence:
ATGGGTTGCAAGCTAACATTTGTCGATGACATCTTAAACCGGTCGTTCTATAAGCTTGGT
CTGGTCGTCGGCAAGCAGCCGGGGTACTTCATCATCATACCAGTTCTCTTAACCTTGCTC
ATGGTCACTGGCTACCAGCGGGTGCACTACGAAATGGATCCAGAATACCTTTTCTCCCCA
GTCAGCGGTCAAGGGAAATTGGAAAGGAGTATCGTTGAAGAACATTTCAAAGTAAATTAC
TCCCATAGATTCAATGTTGGCAGAGTAACAAGAGCAGGTAGGTTCGGGCGAGTGATCATC
ATTGCGAAGGACAATCAAACCAACCTGCTGCGGACAGAAGTTTGGAAAGAGTTAAGACAA
CTGGATGAATATGTTCAGAATATAACTGTGACTTTGGAAGACGGTGAAACATTCACGTAT
AAAGAGGAATGCGCGCGATGGGAAGGACAATGCTTCGTCAACGATATTCTAAATTTGGAT
AAGATTATTGGAGAGGTTGAACGGGGCGAATTGAACTTGACGTTTCCGATAATGTTCAAT
CCTGTCACGTGGGAGGCTCATGCTTTTCCTGTTTATTTCGGCGGTTCAACTGTGGTAGAT
GACACTATAGTATCGGTGCCCGCCGTTCAGCTTGTATGGTTCATCAGGACTGACACTAAA
CTGCAGCAGCAACGAGGTGCAGCTTGGGAAGATGCGTTTCTGGATGCTGTCGGTGTAGTA
GAAGATACAGGACGATTTAAACATATCTCGATAGCGCGATTCGCGTCTCGAACATTAGAT
CATGAACTTGAGAAGAACACGAGAACTGTCATACCATTCTTTAGCTCCACATTTATCCTT
ATGGGGATATTTTCAATAGTGACGTGTATGATGGGAGACTGGGTCAGATCCAAACCCTGG
CTGGGTTTACTTGGAAATATATCAGCCGTGATGGCAACGATCGCTGCTTTCGGTTGTGCC
ATTTATTTAGGCATTTCTTTCATCGGTATAAACCTTGCCGCACCGTTCTTAATGATTGGA
ATCGGTATTGATGACACGTTCGTGATGTTGGCTGCCTGGCGGCGCACGTCCCCCCGTTTA
CCCGTCCCGGAGCGGATGGCTATCATGCTGTCAGAAGCTGCCGTCTCTATCACTATCACT
TCGGTCACTGATATGCTGTCCTTCTTCATAGGCATCTTTTCACCATTCCCCTCCGTTCAA
ATATTTTGCATGTATTCAGGCCTTGCGGTTTGTTTTACGTTTGTATGGCACCTAACATTT
TTCGCCGGATGCGTGGCCGTGTCCGGATACAGGGAGAAAAACAATCGTCACACTATTACG
TGGTTGAAAGTATTGCCGGAATCTAGAGCTAGGAAAGAAGAGAAATCATGGTTATATAGA
ATTTTCTGCAGTGGTGGCATCGATCAGGCTGATCCAGACAACCCGATAGACAACAAAGAA
CATTGCATTATGGCCTTCTTCCGCACTACTATGGCGAATTTGCTCAATAATAGCTTCGTG
AAAGCTTTAGTCATACTTATATTCCTAGGATACTTAGCTGGCGCCGGATATGGAGTGACG
AATCTAAAAGAAGGTTTAGAAAGAAGGAAGCTGTCAAAAGTTGATTCTTATTCTGTGGAA
TTTTTTGACCGAGAGGATTTATATTACAGGGAATTTCCCTATCGAATTCAGGTTGTTATA
AGCGGTAAATACAATTACTCCGATCCTAAAATCCAGGATGAAGTTGAGATTTTGACACAG
AGATTAGAAAATACTTCATACATATCGAATTCTTTGTATACCGAATCCTGGTTGCGGACT
TTCGTGAATTATGTTGAGAGAAACAACGATTATCTCAACATATCAATCGATTCTGAGGAA
GACTTTATTAAGAATCTTAAAGAGTTGTGGCTGTTTTCGGCAAATCCATTTTCGCTCGAC
GTGAAATTCAATAAGGAGGGAGACCAAATTCTTGCATCTAGATTTCTTATTCAAGCTATC
AATATTAGTGGAACTAACCACGAAAAGGAAATGGTTAAAGCTCTTAGAGAAGTCGTTGCC
CAATCTCCACTCAACGCTACCGTATTTCACCCTTATTTCGTGTTTTTCGATCAGTTCGAG
CTCGTGAGACCTACATCTTTGCAAAACCTGTGCTATGGAGCTTTGATGATGATGATAACT
TCCTTTATATTCATACCCAATATACTGTGCTCATTGTGGGTGGCTTTCAGTATAATATCC
ATAGAAATTGGAGTAGTCGGTTATATGGCCCTATGGGATATTAATCTGGACTCAATATCA
ATGATAAACCTCATAATGTGCATTGGCTTCTCGGTTGACTTCACTGCACACATTTGTTAT
GCTTATATGGCGTCCAAAGCTAAGTATCCCAGAGAAAGGGTGAGCGAATGTCTCTACTCG
TTAGGATTGCCTATTGTTCAAGGATCATTCAGCACGATATTAGGAGTTGTTGCATTACTA
CTCGCAGATAGTTATATCTTCTCGGTATTCTTTAAAATGGTATTCATGGTCATTTTCTTC
GGTGCCATGCATGGTTTATTCCTCCTACCAGTTCTTTTGTCCCTCTTTGGTCCAGGGTCG
TGTACAAGGGAAACGAAAGAGATAAAAATAGCAAAAGTAGACAAGATTTTCCCTAATCCG
TATTGCTTACCGCATCCTCAATTGGTTCTGAATGATCAAATTTATAATGGGAAGAATATA
AATCCAAACGGTATTTACAAAATATATGGAGACGACAAGGATCTTGGAATTGGCACGTCC
GGTGAAGATACTAGTGAGAGCAGTTCGAATCAATCACAAAGACGTCAAATTAGCAGCGAC
GAAAACAGCAGAAAGAATTACGAAGACGGATGGAAGAAATTCGGCTATCATCAGAGCACA
AGTCAATTTCAACCGTCAGGGGAGCTGGATTTGTATGAGCACGATCATGATAAGGCTTGG
CAAAGACAACGCAACTATCGCAGTCAAGATAGTTACAAAAGACCAAGCCATAGAGATGGA
GATTTTATAAGAACCAGAAAAACTAGCGATGCCGTTCCAGCCAATGAAGGGACATACAAG
GTGATGAGAACCCACTCCCATCACAACCTTCACAGGCCTCGAGCTCCCAGACGAACAAAC
TCAACCCAGAATCTCGAGCACATTAACTACGTCGGAGAAATGCGCTTTCCTTGA
Protein sequence:
MGCKLTFVDDILNRSFYKLGLVVGKQPGYFIIIPVLLTLLMVTGYQRVHYEMDPEYLFSP
VSGQGKLERSIVEEHFKVNYSHRFNVGRVTRAGRFGRVIIIAKDNQTNLLRTEVWKELRQ
LDEYVQNITVTLEDGETFTYKEECARWEGQCFVNDILNLDKIIGEVERGELNLTFPIMFN
PVTWEAHAFPVYFGGSTVVDDTIVSVPAVQLVWFIRTDTKLQQQRGAAWEDAFLDAVGVV
EDTGRFKHISIARFASRTLDHELEKNTRTVIPFFSSTFILMGIFSIVTCMMGDWVRSKPW
LGLLGNISAVMATIAAFGCAIYLGISFIGINLAAPFLMIGIGIDDTFVMLAAWRRTSPRL
PVPERMAIMLSEAAVSITITSVTDMLSFFIGIFSPFPSVQIFCMYSGLAVCFTFVWHLTF
FAGCVAVSGYREKNNRHTITWLKVLPESRARKEEKSWLYRIFCSGGIDQADPDNPIDNKE
HCIMAFFRTTMANLLNNSFVKALVILIFLGYLAGAGYGVTNLKEGLERRKLSKVDSYSVE
FFDREDLYYREFPYRIQVVISGKYNYSDPKIQDEVEILTQRLENTSYISNSLYTESWLRT
FVNYVERNNDYLNISIDSEEDFIKNLKELWLFSANPFSLDVKFNKEGDQILASRFLIQAI
NISGTNHEKEMVKALREVVAQSPLNATVFHPYFVFFDQFELVRPTSLQNLCYGALMMMIT
SFIFIPNILCSLWVAFSIISIEIGVVGYMALWDINLDSISMINLIMCIGFSVDFTAHICY
AYMASKAKYPRERVSECLYSLGLPIVQGSFSTILGVVALLLADSYIFSVFFKMVFMVIFF
GAMHGLFLLPVLLSLFGPGSCTRETKEIKIAKVDKIFPNPYCLPHPQLVLNDQIYNGKNI
NPNGIYKIYGDDKDLGIGTSGEDTSESSSNQSQRRQISSDENSRKNYEDGWKKFGYHQST
SQFQPSGELDLYEHDHDKAWQRQRNYRSQDSYKRPSHRDGDFIRTRKTSDAVPANEGTYK
VMRTHSHHNLHRPRAPRRTNSTQNLEHINYVGEMRFP