New model in OGS2.0 | DPOGS201059  |
---|---|
Genomic Position | scaffold4029:+ 1056-7544 |
See gene structure | |
CDS Length | 1554 |
Paired RNAseq reads   | 124 |
Single RNAseq reads   | 312 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005207 (3e-123) |
Best Drosophila hit   | CG12512 (3e-87) |
Best Human hit | acyl-CoA synthetase family member 2, mitochondrial precursor (6e-61) |
Best NR hit (blastp)   | PREDICTED: similar to CG12512 CG12512-PA [Tribolium castaneum] (5e-98) |
Best NR hit (blastx)   | PREDICTED: similar to CG12512 CG12512-PA [Tribolium castaneum] (3e-90) |
GeneOntology terms    | GO:0004467 long-chain fatty acid-CoA ligase activity GO:0008152 metabolic process GO:0005875 microtubule associated complex |
InterPro families   | IPR000873 AMP-dependent synthetase/ligase |
Orthology group | MCL10572 |
Nucleotide sequence:
ATGAAAAAAGAGCTTTTGCCGAAAAAATCTGCTACGACCATCCAAACACGATTGCTGAAT
TTTAAGCAGAATGAGTTGACCATCAAAGAATACGGTAAGCAAATCACTGAAATGTTTGTT
GACTTGACTATTTCACAGGCAGATAACGACCCAGAGACTTATAAGGTGCTTAAGCCCTTA
AATGAAAAGCAAGCAATCAAACGATTTGCTGATGGACTGCGAAATCGTAGAACCGGGACT
ATTATTACAGCGCGTAACTTTACATCTTTAAAAGACGCTATTCAATCTGCATTAGATGAG
GAGTTGCCATCCACTTCTAATTCCAATTTAATGAGCATAAATAAAAAAGTTTCCTGTTTT
CGAAATTCCAGGGGACGTTATAATTACCGAGGTAATCAATATCGAGGGTACCGTGCCCAC
CCACAGCACGGCGGTGGTATGAGCAGAGGCCAACAACCAACGTGGCGTGGCACACAGCGA
GGTAGATCATGGCGTGGTAATTCCCGCCCGTACCAGAATAGAGGAAAACCAAAAGCAGCC
TTAGATTCTGAACTAGCAATAGTAAATAATACCTATTTCAGTGGGATAAGGAATGAATTC
AATCTTGGACATCAAATCGTTTGTATTCAGGCCCCATTATTCCATGCATTAGGATCCATA
GTAACTTTGCTGTCGTGTCTTCAACATGGAGCGACAGTCATACTCGCTTCTCCAGCATAC
AGCCCGTCGGCTAGTTTACGAGCAATTTGTGCTGAAAAATGCACTGCCATAACAGGAACT
CCTACGATGTACGTGGATATTTTGTCAATAATGAAGGGCAAGGGTGATTTACCTATTAAC
TTAAATATGGCACTAGCAGCTGGAGCACCGTGCAGCCCCGAACTAATTCATAGAATAAAA
GCCCAATTAAAGTGTAAATCAGTTAGAGCTCTGTATGGATTAACTGAAACGGCTGCTTGT
GTTTTTCAATCATTAGCTACTGATGACGTTAATACGGTATCCCAAACTGTTGGATATATA
ACCGACCACGTGGAACTTAAGGTGGTAGATAGTAATAGTAATATTGTTCCGTTTGGGTGC
TCAGGAGAATTAATGGTTAAAGGTTACAATAACATGATTTGCTACTTGGATGATCCGGAG
AAAACGAAAGAGATAATGACAGAAGATGGTTGGCTTCATACCGGTGATATATTCATAATA
AATCCAGACGGTTATGGAAAAATAATTGGCCGTGCAAAAGATATAATTGTAAGAGGTGGA
GAAAACATTGCTCCCAAAGAAATTGAAGACTGTTTGAACACGCATCCAGATGTCATAGAG
AGTCAGGTGATAGGTGTTTCGGACGAAAGACTTGGAGAAGAACTTTGTGCTGTAGTCAGA
ATCCGAGAGAACGCAACATTTACATCGAATGATTTAAAGAAACATTTTATGGGGAAACTA
GCTACATTTAAAATTCCTAAAATACTTAAAATTACTCAAGAATTTCCGAAAACAACATCT
GGGAAAATACAAAAATATAGATTAAAAGAATTAGTAGAATCTGGAAAAATTTAA
Protein sequence:
MKKELLPKKSATTIQTRLLNFKQNELTIKEYGKQITEMFVDLTISQADNDPETYKVLKPL
NEKQAIKRFADGLRNRRTGTIITARNFTSLKDAIQSALDEELPSTSNSNLMSINKKVSCF
RNSRGRYNYRGNQYRGYRAHPQHGGGMSRGQQPTWRGTQRGRSWRGNSRPYQNRGKPKAA
LDSELAIVNNTYFSGIRNEFNLGHQIVCIQAPLFHALGSIVTLLSCLQHGATVILASPAY
SPSASLRAICAEKCTAITGTPTMYVDILSIMKGKGDLPINLNMALAAGAPCSPELIHRIK
AQLKCKSVRALYGLTETAACVFQSLATDDVNTVSQTVGYITDHVELKVVDSNSNIVPFGC
SGELMVKGYNNMICYLDDPEKTKEIMTEDGWLHTGDIFIINPDGYGKIIGRAKDIIVRGG
ENIAPKEIEDCLNTHPDVIESQVIGVSDERLGEELCAVVRIRENATFTSNDLKKHFMGKL
ATFKIPKILKITQEFPKTTSGKIQKYRLKELVESGKI