| New model in OGS2.0 | DPOGS209499 |
|---|---|
| Genomic Position | scaffold1092:+ 13401-27161 |
| See gene structure | |
| CDS Length | 2355 |
| Paired RNAseq reads | 1785 |
| Single RNAseq reads | 5108 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007342 (0.0) |
| Best Drosophila hit | bicaudal C, isoform B (7e-64) |
| Best Human hit | protein bicaudal C homolog 1 (5e-60) |
| Best NR hit (blastp) | PREDICTED: similar to Bicaudal C CG4824-PA, isoform A [Apis mellifera] (6e-142) |
| Best NR hit (blastx) | PREDICTED: similar to Bicaudal C CG4824-PA, isoform A [Apis mellifera] (5e-129) |
| GeneOntology terms | GO:0007297 ovarian follicle cell migration GO:0048477 oogenesis GO:0007319 negative regulation of oskar mRNA translation GO:0003729 mRNA binding GO:0005887 integral to plasma membrane GO:0005515 protein binding GO:0003723 RNA binding GO:0000226 microtubule cytoskeleton organization GO:0030036 actin cytoskeleton organization |
| InterPro families | IPR004087 K Homology IPR001660 Sterile alpha motif domain IPR004088 K Homology, type 1 IPR018111 K Homology, type 1, subgroup IPR021129 Sterile alpha motif, type 1 IPR013761 Sterile alpha motif-type IPR010993 Sterile alpha motif homology |
| Orthology group | MCL14108 |
Nucleotide sequence:
ATGGAGTCTGCAAATTTCTTAACCGTGAAAAGTCACCTCTCAGAATTCAAAAACTGCTCC
GACAAAGACACTTTAAGCGAGGCATCCGAAAGTGGAACGAGCAATTCCGTGACGTCAGCA
GAAGACTTACAGAAATTAGCAGTAATACTTGGACTGAATAGCGCTGAGGATGTATACCAA
GAAAGATTTCGAGTCGACAGGCGTCGTTTGGAAGCTATGTTGGCAGATCCTCACGTACGA
ATCGCTGGTAGACCTGACGATGTGAAATTAGCTCGAGAGAAGATAATGCAGTTACTGGAT
ACAAGAGGTGGTCTGACTATAAAGCGTGTGATGGAAGACACGGGATGTCACATCCACTTC
CCGGACTCGAACCGCACCAGCGCCCAGGAGAAGAGCAACCAGGTGTCCATAGCCGGGGAC
ATGGAACGAGTTGAACGAGCCCGGGCCAGAGTCAGGGCTCTGACTCCACTGGTGTTCTGT
TTCGAGCTGCCGATAGTGGCGCCCTCTCAGCCGTTACCCGACATCAACTCGCCCTACGTT
CAACAGATACAAGAACAGTACAACGTGCAGGTAATGCTCCGCAACCGGCCCAAGCTACAC
GCGAACCTGTTGGTGGTGAAGGGCGTGCAGTGGGAGGTTCGCGCTACTATGGAAGCCACT
ACGCTGCTCATGACGTACATGTGTGGACCACTGGCGAGTCAAACCCAAGTCCAGATGACG
CTGGAGATATCACCGATGCACCACTCGGTGGTGGTGGGTCGCGGGGCGGAGCAGCTCAAG
GTCATCATGAAGGGCACCGGCACCCAGATCATGTTCCCCGACGCCGATGACCCCAACATA
CCAGCCCTCAGGAAGAGCTGCGTCACTATCACCGGACAGATCAAGGATGTGTACGCTGCT
AGACAGCAACTAGTTGGTAGTCTCCCGTTAGTAGTAATCTTCGACGTGAGCGAGGAGGGC
GCCCGCCTGGAGGCAGACACGGCTCGCCTGATGTGTAAACACAACGTGTACATCAGTGTG
AGACGGAAACCGAAGCAGGGCATCGCCTCCGTTGTCATCAAGGGGATAGAGAGATGCGCT
GGCGACATCTATGAAGCTCGTCGTGAACTCCTCGGCGGCAAGGAACCGTCCATCACGGCC
GAGATACCGGAGTCCTACAACATACCATCCTTAACCAACACGATGCCCAACTTCGGCGCC
TTCAACCCGTTCTCGCCAACTCACGCCAGCGCCATCACCAACTCGCCATGCTCGCCTTAC
AATCTACAATTGAACGAGTTGGCCAGCTTTGGGCCAATGTTTGGCCACAACCCGCCAACC
CCCGGCGGTTATCCCACGCCGTTGTCTCCAGTGGCCATGACACCACCCGTGTTCCCATCG
GGTTGGATGATCCCCTCTCCTCAGCCGAGACCAGGGCAGTTCCACTTCCCTAGTATAGCA
AACGCACCTGTTATGTACAAAAATCAGAGTACTTGGAACCCGATGTCGAGTACCAATGAA
ATGATCCACCCGCCTCATCAGCACACGCATCATCCACAGCATGTGTTGAACGCTAGCTCC
GCAGCGAGCTCCGGGTACCAGAGCAACTTCACTGGCAGCTCTGTATCACTCGACACGCAG
AATATATCCGGCGGTGACGGCAGTAACGTGGTCTCTCCTTCCGTTTCCCCCATCAGCAAG
ACGCACAGCCCTACACCATCCACTGACAACGAGCGATCACAACATGAGCTCGCAAACATA
ATATCTGAGCTGCCGCTGTCTGAACGGCGCGCTGTCGGCTGTGAGAAGAAGACCTTGGAG
AATCTGACGAAGATGTCGCCACTGTCGTCACTGTCGCCGCTCACGCCGCTCAACGACTAC
CGCAAGATGAAAGCGGAAGCTAATAAGGCGATGCGTGAATCGGTGGGGTCCGGCTACAGA
GTTCCTAACACTCGTTGGTCTGGTTATTACTTCAGTCACACCTCACCCGGACCTATCAAC
TTGAAGGAGGAGAATACTACGCCGGAGAAATCCTGGAACAGATCAGATTTGGTTCGTCCA
AACATAGTAGAAACAGCTCCCTCGCCACCAACAAAACAATGCCGCTACCAACAACTGTAC
GATCTGCTCAGGGACATTGGATTACATAAATATATAGATCTGTTCAAGAAGCACGAGCTG
GATATGTCGACGTTCGCGTCTCTGAACGAGGCCGACCTCACTGAGATCGGGATAACAGCT
TTCGGGGCCCGCCGGAAGATGCTACTGGTCATAGCTGAGTTGCAAAAACAGACGAGTTCC
TATAAAGCTGGTTCATCTGACAGGAAGCTGCTAAGCTCACCACAGTACTCTGCGCTGGCG
CAGGACAAATGGTAG
Protein sequence:
MESANFLTVKSHLSEFKNCSDKDTLSEASESGTSNSVTSAEDLQKLAVILGLNSAEDVYQ
ERFRVDRRRLEAMLADPHVRIAGRPDDVKLAREKIMQLLDTRGGLTIKRVMEDTGCHIHF
PDSNRTSAQEKSNQVSIAGDMERVERARARVRALTPLVFCFELPIVAPSQPLPDINSPYV
QQIQEQYNVQVMLRNRPKLHANLLVVKGVQWEVRATMEATTLLMTYMCGPLASQTQVQMT
LEISPMHHSVVVGRGAEQLKVIMKGTGTQIMFPDADDPNIPALRKSCVTITGQIKDVYAA
RQQLVGSLPLVVIFDVSEEGARLEADTARLMCKHNVYISVRRKPKQGIASVVIKGIERCA
GDIYEARRELLGGKEPSITAEIPESYNIPSLTNTMPNFGAFNPFSPTHASAITNSPCSPY
NLQLNELASFGPMFGHNPPTPGGYPTPLSPVAMTPPVFPSGWMIPSPQPRPGQFHFPSIA
NAPVMYKNQSTWNPMSSTNEMIHPPHQHTHHPQHVLNASSAASSGYQSNFTGSSVSLDTQ
NISGGDGSNVVSPSVSPISKTHSPTPSTDNERSQHELANIISELPLSERRAVGCEKKTLE
NLTKMSPLSSLSPLTPLNDYRKMKAEANKAMRESVGSGYRVPNTRWSGYYFSHTSPGPIN
LKEENTTPEKSWNRSDLVRPNIVETAPSPPTKQCRYQQLYDLLRDIGLHKYIDLFKKHEL
DMSTFASLNEADLTEIGITAFGARRKMLLVIAELQKQTSSYKAGSSDRKLLSSPQYSALA
QDKW