New model in OGS2.0 | DPOGS205012  |
---|---|
Genomic Position | scaffold1372:+ 10190-17871 |
See gene structure | |
CDS Length | 1638 |
Paired RNAseq reads   | 654 |
Single RNAseq reads   | 1532 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010240 (0.0) |
Best Drosophila hit   | Cht5 (1e-161) |
Best Human hit | acidic mammalian chitinase isoform c (8e-76) |
Best NR hit (blastp)   | endchitinase [Spodoptera litura] (0.0) |
Best NR hit (blastx)   | chitinase precursor [Bombyx mori] (0.0) |
GeneOntology terms    | GO:0004568 chitinase activity GO:0008061 chitin binding GO:0043169 cation binding GO:0005576 extracellular region GO:0006032 chitin catabolic process |
InterPro families    | IPR013781 Glycoside hydrolase, subgroup, catalytic core IPR002557 Chitin binding domain IPR001579 Glycoside hydrolase, chitinase active site IPR017853 Glycoside hydrolase, superfamily IPR011583 Chitinase II IPR001223 Glycoside hydrolase, family 18, catalytic domain |
Orthology group | MCL17072 |
Nucleotide sequence:
ATGCGAGTGCTACTATTCACGTTGGCCGTCCTGGCTGTTTTCACAGCAGTTAAATCGGAC
AGCAAAGCGCGTGTAGTATGCTATTTCAGCAATTGGGCGGTGTACCGACCAGGTATTGGA
CGTTATGGAATCGAAGATATCCCAGTCCACATGTGCACCCACCTTATATACTCATTTATA
GGAGTCACTAAGAAATCTAACGAAGTACTCGTCATTGATCCTGAGTTGGATATCGATAAA
AATGGTTTCCGTAATTTCACGTCATTAAAGAAATCTAATCCAGACGTTAAGTTCATGGTG
GCCGTGGGTGGCTGGGCGGAAGGTGGTTCCAAGTACTCCCACATGGTTGCTCAGAAGACC
TCTAGAATGACATTTGTTAGGAGCGTCGTCGATTTCTTGAAGAAATATGACTTTGATGGC
CTTGATCTCGACTGGGAGTACCCCGGGGCAGCCGACCGTGGTGGTTCATTCTCAGACAAA
GACCGCTTCTTGTTTTTGGTACAGGAATTGAGGAGAGCCTTCATCAGAGCTGGCAAGGGT
TGGGAACTGACTGCTGCTGTTCCACTCGCAAACTTCAGACTTATGGAAGGTTATCATGTA
CCGGACTTGTGCCAGGAATTGGACGCTATACATGTAATGTCCTACGATTTGCGTGGGAAT
TGGGCCGGCTTCGCAGATGTGCACTCGCCTTTATACAAGCGTCCACATGACCAGTGGGCG
TATGAAAAACTTAATGTTAACGATGGTCTTAATCTATGGGAAGAGAAGGGCTGTCCATCT
AACAAATTGGTAGTAGGAATCCCCTTCTACGGTCGCTCTTTCACGTTGTCCGCTGGGAAC
AATAACTACGGTCTGGGAACATACATCAACAAGGAAGCTGGAGGTGGCAACCCTGCACCA
TATACGAACGCCACTGGATTCTGGTCGTATTATGAGATTTGTATGGATGTGGACAAGCCA
GGTTCAGGGTGGACCAAGAAATGGGATGACCATGGAAAATGTCCCTACGCCTATAAAGGA
ACCCAATGGGTTGGTTATGAGGACCCTGAGAGTGTGGAGATTAAGATGAAGTGGATTAAA
GAAAAAGGCTATTTGGGAGCCATGACTTGGGCCATCGATATGGATGACTTCAGAGGAATC
TGTGGCGAAAAGAATCCGTTGATGAACTTGCTGTACAAATATATGAAATCGTACAGAGTA
CCGCCTCCGCGTACTGGAAACACCACACCTACTCCTGAATGGGCAAGACCGCCTTCCACC
CCATCCGATGCTTCTGAAGGCGCTCCCATCCCCACAACGACTCCGGCCGCCACGCAGGCC
CCCACAAAGAAACCATCTGTCACAAGTACTACAAAGAAGCCGTTGACTACAACCACACAG
GCTTCAAACTCCGGCGATGAGTCAGAGTTACCAGATAGACCCAGTGACGTAGAGCAACCA
GTGGAGAACGAGATAGACAACCCTGAAATATGCAGCTCCCAGGATGACTACGTCCCTGAC
AGGAAGCATTGCGATAAGTACTGGAGATGCGTTAACGGCCAAGGAGTACAGTTCACGTGC
CAGCCAGGTACCGTGTTCAATTTCAATCTGAATGTCTGCGACTGGCCCGGGAACGCTGAC
CGCGACGAATGCCTTTAG
Protein sequence:
MRVLLFTLAVLAVFTAVKSDSKARVVCYFSNWAVYRPGIGRYGIEDIPVHMCTHLIYSFI
GVTKKSNEVLVIDPELDIDKNGFRNFTSLKKSNPDVKFMVAVGGWAEGGSKYSHMVAQKT
SRMTFVRSVVDFLKKYDFDGLDLDWEYPGAADRGGSFSDKDRFLFLVQELRRAFIRAGKG
WELTAAVPLANFRLMEGYHVPDLCQELDAIHVMSYDLRGNWAGFADVHSPLYKRPHDQWA
YEKLNVNDGLNLWEEKGCPSNKLVVGIPFYGRSFTLSAGNNNYGLGTYINKEAGGGNPAP
YTNATGFWSYYEICMDVDKPGSGWTKKWDDHGKCPYAYKGTQWVGYEDPESVEIKMKWIK
EKGYLGAMTWAIDMDDFRGICGEKNPLMNLLYKYMKSYRVPPPRTGNTTPTPEWARPPST
PSDASEGAPIPTTTPAATQAPTKKPSVTSTTKKPLTTTTQASNSGDESELPDRPSDVEQP
VENEIDNPEICSSQDDYVPDRKHCDKYWRCVNGQGVQFTCQPGTVFNFNLNVCDWPGNAD
RDECL