| New model in OGS2.0 | DPOGS211488 |
|---|---|
| Genomic Position | scaffold1506:- 6776-21521 |
| See gene structure | |
| CDS Length | 6075 |
| Paired RNAseq reads | 249 |
| Single RNAseq reads | 603 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002748 (0.0) |
| Best Drosophila hit | Cad89D (2e-170) |
| Best Human hit | protocadherin Fat 1 precursor (1e-85) |
| Best NR hit (blastp) | PREDICTED: similar to CG14900-PA [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG14900-PA [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0007155 cell adhesion GO:0016339 calcium-dependent cell-cell adhesion GO:0005887 integral to plasma membrane GO:0016021 integral to membrane GO:0007156 homophilic cell adhesion GO:0005509 calcium ion binding GO:0005886 plasma membrane |
| InterPro families | IPR002126 Cadherin IPR020894 Cadherin conserved site IPR015919 Cadherin-like |
| Orthology group | MCL15729 |
Nucleotide sequence:
ATGAATTTACACATGTTTGGCTGCAACTTCTACCCGGTGGGTGACTACCTGAAGTTCGTT
AGAATACCAGAGAATCTCCCGGTCGGGGGGGAAGTGTTGCGCGTGGAAGTACATCCCAGG
AAAAATCTAATGCTCCAAGCGGTGGACCGCGAGGAAGACGCTCATCTGTTCACATACAGA
GACGTAAACAGAACTCATGTCTCCATCGTGCTAGCTCAGAGCGTGGACGAGCTGGTGGAT
AGCGACACTCCGCAGAATGTGGTCAAGTTCAGACTGGGATGTGACTTCGATACCGGAGAT
GACTTGATCTCAGCGTTTCTTTCTGTTACTGTATACATCGAAGACATAAATGATAACCCA
CCGAGATTTTTGGATACGCCTTACCGCGTCACAGTGGATGAATTAACTCCAACTGGCCTC
ACAGTGTTTAAGGGCATTCGTGCTTTTGATCGCGATAAGCCGAACACTCCTAACTCTGAC
GTTACCTACACTATCACGGCCGGCGATGATGACGGAAGGTTTATTCTCGAGAGTTCTCAT
AAGCCAGCTCTTATTCTGAACAAACCTTTAGATTTTGATAATGGAGACAAGGAGTTCCTT
ATAGTTGTTACGGCATCGGATCGTGGTTCACCGCCAAAAAGCTCTAATACGACGATCCAT
ATTTTAGTTCAAGATAATGACGACCTTCCTCCCAAATTCACTCTTGATGTTTATAAGACA
AAAATACCAGAATTTTATCCAATACTGGGCAAAAGGATTCATAAAGAACTTATATTTGAC
AAACCAATTCGAGCATTTGATCAAGATGCAGGAGTTGCTGCCCCAATCCGATATGAACTA
GTGTCGGGAAACGAACGAAGACTGTTCCTGTTGAGCCCTTTGAATGGCAGTTTGTTTCTT
GAGAAAGAAGTGGATTTAGATGCTGAAGTAGCTTTACCAGGAAATACATTTGTTCTACAA
ATTCAAGCATCACAAGTCGATAATCCGTTAAAAACGGCGCAAGCACGAGTCGAAATAGAA
ATCCAGGATTTAAACGACAATCTTCCAGATTTTGAAGTTGACTTTTATAATATAAGCATC
GTTGAAAATTTACCGAACGGTTTCAGTGTCTTACAAGTAATGGCGAGTGATAAAGATCAG
GGGGATAACGGAGAGTTTACCTATCAACTAAATGATCCAATAGCAGCATTTTCTATAGAC
CCTCGGACAGGTTGGCTAACTGTTAGAAATCAAACTGAACTGGATAGAGAACAACACTCT
TCATTAAGAATGAAAGTTTACGCAAGGGAAAAAAATCCAAGTATCGTAGGAAAATTTTTG
GACAGTCAAAGACTATCAAAATGGCGGCGAAATCCTACAACTCAAAGACCACTCATCAAA
GACAAAACAACTTACGTGTTTCCTGATAAAATAGGCACCAGCAGCGAAAACATTGAATAT
ATCGACGAATCACATCAATTAATGTCGTATGTCACTGTTGAAGTGACGTTGCTGGATGCC
AATGATAACAATCCTGTATTTATACCGAGTAATCTTTACGAATTTTCCATTAAAGCTGAT
GCAAAGATTGGGACTGAGATAGGGACTGTGAAAGCCGTTGATCCGGACTTGGGACGAAAC
GGTGTCGTGTTATATGATTTGCAACGAACTAGTAATTTGACCATAACATCACCGTTTCAA
ATTGATGCCCAAACTGGGGTCATCACCTTAGTTGAGTCTAATTTGTTAGAGGGAAGACAT
GCTCTATTTATTGAGGCATCCGATCAACCTGCTAATCCTAGTGAACGACGATATTCTTTG
GCTGTTGTGACCATTGATGTTGTTGGTTCAGCAAAAGGAGCGAAACAAGATAGACCTGAC
TTTTTAGGAGCCCCTTATGAATTTTGGGTTGGGTCTAACGTCGGCATCGGTACAAGTGTC
GGCCAAATAAAAGTTAATGATGCCATTGATAAAAATGATCTCACTTATGATTTACTGCAT
GCATATGAAGAAGGAGTTCCTTTTGCAGTGGAAGAACGTTCAGGAGTAATCACAGTTATT
GATGAACTTTCAAAATTCGTTAGACCCCTTTATGATTTTGAAGCTGTTGCAATACAAGAA
AAACAAAACTTCACGCTAACGACAAATGCTACTGTACATGTTGTTGATGTAAATGACGAG
AGAGGTGTCTTTTTGAAGGGAACACATTCTCCCTTCGTGTTTCACGTTAAGGAAAATGTA
GCTGGCGCAACAATTGGTCAAATTTTTCCCGTTAATTCAAGTTCTAACTCAAATAATAGC
TTAAACATAAAATTTATAATCGCCAATCAGCAAGATGTTTCTGATGACATAGCTATAGGT
CCAGATGGAACAATATATGCTCAAAAGCCATTGGACAGAGAAAAAAGGGACGTGTATAGA
ATGACAGTCATTGCTGAATTTAATAAAGGAATTATTTCTGGAGCAGGACTTTATCAGATC
ACGGTGCATGTGGATGATGAAAATGACTGTCCACCTGTATTTGATTTACCAGCGTTTGAA
GGATCTATTGTTGAAAACTCTAAAAAAGGAACTGAAGTTAAAATGACAAACAAAATACAT
GCAAGTGATAATGATATGGGGCAGAACGCTGTATTTATGTATACTCTATTTGGCGATGGA
CACGATCAATTCAGTGTCAATGAAGATACTGGAGTAGTATTCTTTATTGGTAACAAACTA
GATCGAGAAGAAAAAAATCAGTATTTATTAAAAATTGTTGCAAGAGATAAAGGAAGTCTA
AAGTCTGAAGCTAAGTTAACCATAACAGTACTCGACGAAAATGATAATTCACCGAAATAT
AACCAAATTATTATTCCGCTAGCAGAGTCAGTAGAATTTTTAGAAAATAAAGTAAATACC
TCGGTGAAAGTTTTTCATGAACAAATAAATAATGTGACTGGTGTAATTTTGAATATTGAA
GCAAAGCCAAAAAATTCATTTTCAATATCTACACAATCACCTTTATTTTTGATTCCTGAA
AATATAGCTGTCGGTACAACTATTTTAAAGTTAAACGCTATAGATATGGATAGTGGTATA
AACGGACAATTGCGCCATGAATTTTTGTCAGAATTATTCATGCCTCCCTACGCGTTCTCT
GGAAATGCATTTCAAGCAAAAAGATTTTTCGTTATTAATGAAAGACATGGTCATGTTGTT
GTTGCGAGAGCACTGCCGCCTGAATCAGAGTTTCGATTGAACATCACTGTAATAGATGGC
GGAGGATTAAGCGACTTAATCACTATAAGACTATTCGTTAAGGATGTAAATGATCATTAC
CCAATGTTTAAAAAGTCTTGGTATAACTTTAATGTAGAAGAGGCGCAATACAGTAGGAGG
ATATTGGGAAAAGTTGATGCGACGGACGCAGACTTTGGTCAAAACTCTAATTTAACATAT
TTTATTCAACCATCCAGCAAGGATTTACCTTTTGAAATCTCTCCTTTGGGTGGTGTCTTT
AGTGTTAATGGTATTCTAGACAGGGAAAAAGAAGATAAGTACACTATAACAGTAGTTGCT
CGTGACAATGGACCAAACGAAAAGTTGTCCTCGTCTGTGACTGTTGAAATACAAGTTCTG
GACGTAAATGATAATGCTCCAAAATTTTTTGCATATGATGAATTATTAGAATGGAAACAT
CCGGAAGCCGATGAAATTTCGAATCATAATTTTGAATCGGTGATGATGATTCCCGTATAT
AAAGCAACATTGGACGAAAATGCACCCATCGGAACAACTGTCACAAGGGTCTATGCTAAT
GATTCAGATTTCATTGGTAACGGAAATGGCCTAATTTTATATAGTTTACCTCAACGAAAA
AATCAAGTAAATATGTTTAGTATTGATTCTAAGGAAGGATTTCTTACTACTACTACAAGA
TTGGATTATGAAAGTCAGAAAGAACATAACATTACGGTAGTGGCTTCGGATTTAGGATCA
CCAAGTTTAAGCTCCACTGCTATAGTAATTTTAACTGTGAACGATGTTCCAGACGAAGTT
GAAGTTTTTGATAAACCTGTTTTTATTTCGCGGTACTATGAATTGGAAATTGAAGAAAAC
GTTCATACTCCGATCGAGCTTGTAACCTTAAATCTTACAGAGTACTATGAAACATTCAAA
ATGAGGTATTTTATTCTCAACGAAAACGACACTGATATTAAAAAGACTTTTGTAATAGAT
CCTCGTAACGGCACACTATATTTAATCAGAAGTCCCGATCGGGAAGTGAAAGATCTTTAT
GAAATTATAGTTAGGGTCGAAAGACAGAAAATTAGTCGTGAGTTACCTCATATGATATAT
CCAGTTTCCGACGACGTCCTTGAAGGAATGACAAAATATGATGTTAAAGTTGTTGTCAGA
ATAAAGGACGTGAATGACAACGCACCAAAATTCGTAAATGGTGGAAGGCCTATGGTCACT
GCAATACCAACCACAGCGCCATTTGGATACGAAGTTATCCAGCTACAGGCAGTCGACGCA
GACATCGGCCACAACGCTGATATCAGGTACCAGGTGATCAACTCTGAGAGCGCGCGATTC
ACTGTGGACCAGGTGTCTGGCCGTGTGAGGGTCGCTGGCAGCGTGCTCAGGGACGCCGGT
CGAGTTCTTGGCTTCGACGTCAAAGCTACCGACAGGGGAGGCGCAGATGATGGCCGATCA
GCTATCGTTAACGTTTTTGTATATGTGTTAGATCAAAACAAACAGTTGGTAATGGTGATT
GGAGCGAAACCCATGGAGGTGGAAAAAGGAATGGATAATATAACAAAACATCTGTCGAAT
ATGACTGGTTTTGACGTTCGAGTGAGAAAACTTGAAGCAAACCCGAGGGCCTCCATGGAC
GGATACGCTACAAATTTGTACATTTATGCCGTTGATCCAATATCTAACGCCATAATTGAC
ATGGAATCATTACAAAAGTCGTTGATAAGAAGGGAGGCATCCCTTCGTCGTGATCTCGCC
GGTTTTAAGGTTTTAGAGGTGGGAGACACTACAATGGTGCAAGCCAGAAGCAGCCAAGTA
TTAAGTACTATGGAAATAAGTGTCGTGGCGTTGGGATGCCTGGTGTTTGTTGGAGCTTTC
ACAACTGCGATTTGCATTCTTTGTGTAAGAAAAACTCGAAGAAGTCGCCACAAACCATTT
TCCCAACAACGTCTTAACGCTTTCTCCACTGAGCACCTTACTAAATACGGCGGTCTCTTT
CCATCCGGGAACAACCAGTGCCAGGAACTCAATCAGTCCTTTAGCGAAGGCGATTCATAC
GTTGATGTCATTAATCAGAGCACTTTAAAGAAAACCTGCCCTCGGGGCAACTCGGTTGAG
CAATTTGGAAAAGCACATCAAAAATGTGTCAAAAGTCAATTTGTAGACATTAACGGAAAG
GAGAAACATGAGAGAATGTGTATTAAGTTTAACCAACGGCCTTCACAAAAGAGGAAAGGT
CAAGACACTTCGATAACGTCAGTGAATTCCAGCGGCCAGGACTCGGGCATCGCGGAGGTG
AGATGCTCGTGCGGCCGATCAGCTCATACCTCGCTCCTCTCGTCGCCCATTTATGTCAAT
GATGTATATTGCAGTTATGAAGACTCATTAAAGTCGACTCACAATCAAGATGTTAAGAAG
TTCCGACACGGAGGAGAGAACAAATTCCTCCGAAGAGCATCCTTCAATAATCACGCCTTC
GATTCGCGGAAGTACAATCCACGAAGACAATCGTTTTCAGAAAATCTTCAACGACACTTC
CCCTCTGTTGAGAGAATTGGATCTACAGGGCTATCCAGACAAATCTCATCGCCGAACGTG
AGCTCTCCGAGTTACTTTTATAACGCCAAAAAGAATTATAGAAAGAAAGAAATGATAAGT
GAGCCGGTAGTCGACTATGATCATAGTGAAGTAGACGATGTGTTCGACACGAGGTTAGAC
AGAAGACTGAGCGGGAGAAACAAAAAAGACAACTTCATGGAACTCGGTCAAGCTGTGTTC
GTAGCGACACCTGCCACCGCCGAGATGATTAGGAGACAGGGAAGTGAGAGGCTGGTGTTG
GCCAGGCCTTTATAG
Protein sequence:
MNLHMFGCNFYPVGDYLKFVRIPENLPVGGEVLRVEVHPRKNLMLQAVDREEDAHLFTYR
DVNRTHVSIVLAQSVDELVDSDTPQNVVKFRLGCDFDTGDDLISAFLSVTVYIEDINDNP
PRFLDTPYRVTVDELTPTGLTVFKGIRAFDRDKPNTPNSDVTYTITAGDDDGRFILESSH
KPALILNKPLDFDNGDKEFLIVVTASDRGSPPKSSNTTIHILVQDNDDLPPKFTLDVYKT
KIPEFYPILGKRIHKELIFDKPIRAFDQDAGVAAPIRYELVSGNERRLFLLSPLNGSLFL
EKEVDLDAEVALPGNTFVLQIQASQVDNPLKTAQARVEIEIQDLNDNLPDFEVDFYNISI
VENLPNGFSVLQVMASDKDQGDNGEFTYQLNDPIAAFSIDPRTGWLTVRNQTELDREQHS
SLRMKVYAREKNPSIVGKFLDSQRLSKWRRNPTTQRPLIKDKTTYVFPDKIGTSSENIEY
IDESHQLMSYVTVEVTLLDANDNNPVFIPSNLYEFSIKADAKIGTEIGTVKAVDPDLGRN
GVVLYDLQRTSNLTITSPFQIDAQTGVITLVESNLLEGRHALFIEASDQPANPSERRYSL
AVVTIDVVGSAKGAKQDRPDFLGAPYEFWVGSNVGIGTSVGQIKVNDAIDKNDLTYDLLH
AYEEGVPFAVEERSGVITVIDELSKFVRPLYDFEAVAIQEKQNFTLTTNATVHVVDVNDE
RGVFLKGTHSPFVFHVKENVAGATIGQIFPVNSSSNSNNSLNIKFIIANQQDVSDDIAIG
PDGTIYAQKPLDREKRDVYRMTVIAEFNKGIISGAGLYQITVHVDDENDCPPVFDLPAFE
GSIVENSKKGTEVKMTNKIHASDNDMGQNAVFMYTLFGDGHDQFSVNEDTGVVFFIGNKL
DREEKNQYLLKIVARDKGSLKSEAKLTITVLDENDNSPKYNQIIIPLAESVEFLENKVNT
SVKVFHEQINNVTGVILNIEAKPKNSFSISTQSPLFLIPENIAVGTTILKLNAIDMDSGI
NGQLRHEFLSELFMPPYAFSGNAFQAKRFFVINERHGHVVVARALPPESEFRLNITVIDG
GGLSDLITIRLFVKDVNDHYPMFKKSWYNFNVEEAQYSRRILGKVDATDADFGQNSNLTY
FIQPSSKDLPFEISPLGGVFSVNGILDREKEDKYTITVVARDNGPNEKLSSSVTVEIQVL
DVNDNAPKFFAYDELLEWKHPEADEISNHNFESVMMIPVYKATLDENAPIGTTVTRVYAN
DSDFIGNGNGLILYSLPQRKNQVNMFSIDSKEGFLTTTTRLDYESQKEHNITVVASDLGS
PSLSSTAIVILTVNDVPDEVEVFDKPVFISRYYELEIEENVHTPIELVTLNLTEYYETFK
MRYFILNENDTDIKKTFVIDPRNGTLYLIRSPDREVKDLYEIIVRVERQKISRELPHMIY
PVSDDVLEGMTKYDVKVVVRIKDVNDNAPKFVNGGRPMVTAIPTTAPFGYEVIQLQAVDA
DIGHNADIRYQVINSESARFTVDQVSGRVRVAGSVLRDAGRVLGFDVKATDRGGADDGRS
AIVNVFVYVLDQNKQLVMVIGAKPMEVEKGMDNITKHLSNMTGFDVRVRKLEANPRASMD
GYATNLYIYAVDPISNAIIDMESLQKSLIRREASLRRDLAGFKVLEVGDTTMVQARSSQV
LSTMEISVVALGCLVFVGAFTTAICILCVRKTRRSRHKPFSQQRLNAFSTEHLTKYGGLF
PSGNNQCQELNQSFSEGDSYVDVINQSTLKKTCPRGNSVEQFGKAHQKCVKSQFVDINGK
EKHERMCIKFNQRPSQKRKGQDTSITSVNSSGQDSGIAEVRCSCGRSAHTSLLSSPIYVN
DVYCSYEDSLKSTHNQDVKKFRHGGENKFLRRASFNNHAFDSRKYNPRRQSFSENLQRHF
PSVERIGSTGLSRQISSPNVSSPSYFYNAKKNYRKKEMISEPVVDYDHSEVDDVFDTRLD
RRLSGRNKKDNFMELGQAVFVATPATAEMIRRQGSERLVLARPL