New model in OGS2.0 | DPOGS212120  |
---|---|
Genomic Position | scaffold677:- 43306-76814 |
See gene structure | |
CDS Length | 1032 |
Paired RNAseq reads   | 1696 |
Single RNAseq reads   | 4451 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006590 (2e-128) |
Best Drosophila hit   | syntaxin 1A (7e-104) |
Best Human hit | syntaxin-1B (5e-91) |
Best NR hit (blastp)   | Syntaxin 1A [Tribolium castaneum] (1e-136) |
Best NR hit (blastx)   | Syntaxin 1A [Tribolium castaneum] (4e-129) |
GeneOntology terms    | GO:0006887 exocytosis GO:0007268 synaptic transmission GO:0005886 plasma membrane GO:0005484 SNAP receptor activity GO:0007269 neurotransmitter secretion GO:0006936 muscle contraction GO:0016020 membrane GO:0042335 cuticle development GO:0007317 regulation of pole plasm oskar mRNA localization GO:0016192 vesicle-mediated transport GO:0016081 synaptic vesicle docking involved in exocytosis GO:0007349 cellularization GO:0016021 integral to membrane GO:0000910 cytokinesis GO:0006886 intracellular protein transport GO:0007482 haltere development GO:0031629 synaptic vesicle fusion to presynaptic membrane |
InterPro families    | IPR000727 Target SNARE coiled-coil domain IPR006012 Syntaxin/epimorphin, conserved site IPR010989 t-SNARE IPR006011 Syntaxin, N-terminal |
Orthology group | MCL12012 |
Nucleotide sequence:
ATGACGAAGGACAGGTTAGCGGCGCTCCAAGCGGCGCAAAGTGACGATGATGACGTCGGC
CCCGATGACGTTAATGTCCCCGTCGAAGGAGGTTTCATGGATGAATTCTTCAGTGAGGTG
GAAGAGATACGAGAAATGATAGACAAGATACAGGCGAACGTCGAAGAGGTGAAGAAGAAG
CATAGTGCCATTTTATCAGCGCCGCAATCAGATGAAAAGACAAAGCACGAACTTGAAGAT
CTCATGGCCGATATTAAGAAGACTGCCAATAAAGTTAGAGGCAAATTAAAACATATAGAA
CAAAACATCGAACAAGAGGAGCATTCCAACAAATCGTCCGCCGATCTCAGGATAAGAAAG
ACCCAGCACTCGACACTGTCTCGCAAGTTCGTGGAGGTGATGACGGAGTACAACCGTACC
CAGACCGACTACAGGGACAGGTGCAAAAACAGAATACTCAGACAGCTGGAGATCACGGGA
CGGGCCACGACCGACGACGAGCTGGAGGCTATGCTGGAGCAGGACAATCCAGCGGTATTC
ACCCAAGGGATTATAATGGAGACTCAGCAAGCCAAGCAGACCCTGGCCGATATAGAAGCC
CGACACGCTGATATCATCAAGCTGGAGACCTCCATCCGCGAGCTTCACGACATGTTCATG
GACATGGCAATGCTTGTTGAGAGTCAGGGTGAGATGATCGACCGCATTGAGTATCATGTA
GAGCACGCTGTGGACTATGTCCAAACTGCCACCCAAGATACAAAGAAGGCCCTTAAATAT
CAGAGCAAAGCCCGACGGAGCGAGCAGGGTGAACTGATAGATCGCATCGAGCACCACGTG
ACCGCTGCCACTGACTACGTGGAGTCCGGTGGGGGGGAGCTTGTACAGGCTCACAAGTGG
GCGGTTAAAGCGAGGAAGAAAAAAATCTTCCTCATAATATGCCTGACCATTTCGCTGAAG
AAGATCATGATCCTTGTATGCCTGCTCATACTGGGCCTGGTGGTGGTCGGATACGTCTGG
TCCTCATTGTGA
Protein sequence:
MTKDRLAALQAAQSDDDDVGPDDVNVPVEGGFMDEFFSEVEEIREMIDKIQANVEEVKKK
HSAILSAPQSDEKTKHELEDLMADIKKTANKVRGKLKHIEQNIEQEEHSNKSSADLRIRK
TQHSTLSRKFVEVMTEYNRTQTDYRDRCKNRILRQLEITGRATTDDELEAMLEQDNPAVF
TQGIIMETQQAKQTLADIEARHADIIKLETSIRELHDMFMDMAMLVESQGEMIDRIEYHV
EHAVDYVQTATQDTKKALKYQSKARRSEQGELIDRIEHHVTAATDYVESGGGELVQAHKW
AVKARKKKIFLIICLTISLKKIMILVCLLILGLVVVGYVWSSL