| New model in OGS2.0 | DPOGS213608 |
|---|---|
| Genomic Position | scaffold271:- 170751-173196 |
| See gene structure | |
| CDS Length | 987 |
| Paired RNAseq reads | 341 |
| Single RNAseq reads | 872 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011671 (6e-84) |
| Best Drosophila hit | CG7504, isoform C (4e-27) |
| Best Human hit | probable helicase senataxin (7e-25) |
| Best NR hit (blastp) | PREDICTED: similar to splicing endonuclease positive effector sen1 [Nasonia vitripennis] (1e-44) |
| Best NR hit (blastx) | PREDICTED: similar to splicing endonuclease positive effector sen1 [Nasonia vitripennis] (7e-42) |
| GeneOntology terms | GO:0003674 molecular_function GO:0005575 cellular_component GO:0008150 biological_process |
| InterPro families | ND |
| Orthology group | MCL17605 |
Nucleotide sequence:
CTTCGCGGCGGCGGCGTGCGTCCGGGCCAGCTCGTGGATGTGGAGCGTCGGTTGGTGGAA
GAAGCCGACATCGTGGCCACAACCCTCGCCAGCTCAGTCAACCACAAGATGCGGGGGTTG
AGAGGTATCGAACTTTGCATAGTGGAGGAAGCCGGTCAGGCCATCGAACCCGAGACCTTG
CTGCCTCTGATGCTGGGAGTCAACAAGATGACGCTGGTGGGAGACCCGCAACAACTGCCG
GGGTACATCTGTTCGGAGCGAGCCAAGACGCACGGTCTGGACAGGAGTCTGTTCTCCCGC
TTGGCCGCGTATAGTGAGTGCTGGGAACGGCCACCGTTGGTGCTACTGGATCGCCAGTAC
AGGATGCACCCCACCATCGCCGACTACCCCAACAGAGCCTTCTATGGGGGGAGGGTGCAG
TCCGTGCCCCCACCACCACTCTCACTACACCTACCACCCTACTGCATACTCGACATACCG
GGGAGTGAACATGACGAGGCGTGGGGCGCGGCCCGGGTGGCGCTGGCGGTGTTCTCAGCG
GCCCGAGCCCACAACCCTCAGCTGTCCGTGGCCGTCATCACACCGTACGTCGCTCACAGA
GACTTACTGAGGAAGTACCTCCTGGAACTCGACGAGTCTGCTCGTGGCGTGGAAGTCAAC
ACGGTGGACAGCTTCCAGGGTCAGGAGCGGGACCTGGTGGTGGTGTCGCTGGGGCGGCGG
CAGGGCGTCGGCTTCCTGGCACATGCTGGACGGATGAACGTCCTCCTCACGCGAGCCAGA
CACGTCCTCATACTCTGCCTATACAAAAACGCTGTCGAGAAACACGATCAATGGCGTACT
TTAGTCAGAGATGCCGAAGGAAAGAGCTTGTTCAAGACCCTCCCCAGCTACATGTGCAGA
CCCAGCGGCCACTCTGCCAGGCAGGCTTCCTCCAAGGAAGTGTTAGAATTCTTAAGATCT
AAAAAGAATAAGCACGGACATAAATGA
Protein sequence:
LRGGGVRPGQLVDVERRLVEEADIVATTLASSVNHKMRGLRGIELCIVEEAGQAIEPETL
LPLMLGVNKMTLVGDPQQLPGYICSERAKTHGLDRSLFSRLAAYSECWERPPLVLLDRQY
RMHPTIADYPNRAFYGGRVQSVPPPPLSLHLPPYCILDIPGSEHDEAWGAARVALAVFSA
ARAHNPQLSVAVITPYVAHRDLLRKYLLELDESARGVEVNTVDSFQGQERDLVVVSLGRR
QGVGFLAHAGRMNVLLTRARHVLILCLYKNAVEKHDQWRTLVRDAEGKSLFKTLPSYMCR
PSGHSARQASSKEVLEFLRSKKNKHGHK