| New model in OGS2.0 | DPOGS213612 |
|---|---|
| Genomic Position | scaffold271:- 130661-132766 |
| See gene structure | |
| CDS Length | 1362 |
| Paired RNAseq reads | 195 |
| Single RNAseq reads | 486 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011801 (0.0) |
| Best Drosophila hit | CG32085 (7e-163) |
| Best Human hit | F-box/LRR-repeat protein 16 (1e-113) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP012123-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP012123-PA [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0005515 protein binding |
| InterPro families | IPR006553 Leucine-rich repeat, cysteine-containing subtype |
| Orthology group | MCL15380 |
Nucleotide sequence:
ATGTCGTCGGTGTCAGCGCAAGGAGTGGTCGAGCGCGCTTCCGCGGAGCTATCCCGCCGC
ATAACAGGACTGGGACTTCGAGGTCGTAAACGTTCGCCGGGAGTCGTCGAGAGAGTAGCC
AATGCCTTGTGCGGGCCTGCCACCACCGCCCCACCGAGGATACCCCGCCGGAGACGACCC
TCGCCGAGACCGCTTGTGTGGAGCCAATTTATTATAGAGGAGAGATTCCTGGAGAAGTTC
TTTCTGTATTTCAATGGCAGCGAAAGAAGAACCCTTGCTCAAGTCTGTACTAAATGGCGT
GATGTCCTGTATTCTTCTCCCCGTTGGTGGAATGGCCTAGTCGCTGTTCTGGATTGTAGG
GAACTACGATCTGAAACTGGTTGTTGCATGCAAAGATTTTACAATTCGGTTGTGAGGAGG
GGTATCCGAGGATTTGTACTAATATCTGCAACAGATGATGATATAAATGAATTAATAAAA
CAGTTTCCGCTCTCAGCTCATCACATACATGCTATTGGTTTAAAAGGATGCACAATAACC
GATCGAGGTTTAGAATCAATACTCGATCATTTACAGGTTCTCTTTGAACTAGAACTAACA
GGCTGTAATGAAATAACTGAAGCTGGTCTCTGGGCTTGCTTAACTCCTAGGATTGTATCA
CTTACACTTACCGACTGCATTAATATTGCTGATGAGGCAGTGGGTGCGGTTGCTCAGCTG
TTGCCGTCGCTATATGAGTTCTCATTGCAAGCATACCATGTGACCGATGCAGCACTCGGT
TATTTCTCACCAAAACAAAGTGCCTCACTCAGCATCTTAAGATTACATAGTTGCTGGGAG
CTTACTAACCATGGCGTCGTTAACATTGTGCATTCTCTGCCGAACCTGACAGTGCTGTCC
CTCAGTGGATGCAGCAAGGTCACTGATGAGGGTGTGGAACTCCTGGCTGAGAATCTGCCG
CGTCTACGAAGCCTCGATCTCAGCTGGTGTCCGCGGGTCACTGACAACGCGCTCGAATAC
ATCGCCTGCGACCTGAACCAGCTTGAAGAACTCACGTTGGACCGATGTGTGCATATAACG
GATATCGGCGTGGGCTACATTAGCACAATGCAGTCGTTGGCCGCGCTGTTCCTGCGCTGG
TGTTCTCAAGTGCGGGACTTTGGTGTGCAGCATCTGTGTGGCATGCGAAGTCTGCAGCTA
CTGTCGCTCGCCGGTTGTCCGCTTCTCACATCCGGTGGCCTCTCAAGCTTGATCCAATTG
AGGCAGCTACGAGAACTCGAACTGACAAATTGTCCGGGAGCATCCCCTGAACTGTTTGAC
TACCTTCATGAGCATCTACCGCGTTGCCTCATCATAGAATAA
Protein sequence:
MSSVSAQGVVERASAELSRRITGLGLRGRKRSPGVVERVANALCGPATTAPPRIPRRRRP
SPRPLVWSQFIIEERFLEKFFLYFNGSERRTLAQVCTKWRDVLYSSPRWWNGLVAVLDCR
ELRSETGCCMQRFYNSVVRRGIRGFVLISATDDDINELIKQFPLSAHHIHAIGLKGCTIT
DRGLESILDHLQVLFELELTGCNEITEAGLWACLTPRIVSLTLTDCINIADEAVGAVAQL
LPSLYEFSLQAYHVTDAALGYFSPKQSASLSILRLHSCWELTNHGVVNIVHSLPNLTVLS
LSGCSKVTDEGVELLAENLPRLRSLDLSWCPRVTDNALEYIACDLNQLEELTLDRCVHIT
DIGVGYISTMQSLAALFLRWCSQVRDFGVQHLCGMRSLQLLSLAGCPLLTSGGLSSLIQL
RQLRELELTNCPGASPELFDYLHEHLPRCLIIE