| New model in OGS2.0 | DPOGS208450 |
|---|---|
| Genomic Position | scaffold242:+ 103889-117322 |
| See gene structure | |
| CDS Length | 2241 |
| Paired RNAseq reads | 1828 |
| Single RNAseq reads | 4381 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008853 (0.0) |
| Best Drosophila hit | CG3961, isoform C (0.0) |
| Best Human hit | long-chain-fatty-acid--CoA ligase 5 isoform b (1e-179) |
| Best NR hit (blastp) | PREDICTED: similar to CG3961 CG3961-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG3961 CG3961-PA [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0004467 long-chain fatty acid-CoA ligase activity GO:0008152 metabolic process |
| InterPro families | IPR020845 AMP-binding, conserved site IPR000873 AMP-dependent synthetase/ligase |
| Orthology group | MCL10962 |
Nucleotide sequence:
ATGGGTAGTGGGAAGTTTGGACTGAGCGTTAAAAAGGAAAAAGTGAACATGACGGAGGCT
AATAAGACTGAGTTTAGTGTTAAGGAAAAATGCCTCAAGTTAAAGAAGAAACTGACAAAG
ACTGAAAAAATGAAGACTGAAACAAATTCAAAGGAGAAGACTATATGGTGGAATCAGTGC
AGCAGTTTAAGCGAAATAGACCAATATCTATGGATGGTGGGTGGCTCTGCCGGTGCACTG
GCACTAACTGGTGTCGCTGCTGCATCAGCCTTCTATCTCAGCACAAGGCCGAAACCAGAG
AAGCCTTTAGTCACGTTACACGAACAAAGCCTCTTGGAGACGGGGCCTGAAATGGTTCGT
GTTTCAAAATTCTATAAAGAAGCGAAAAACGGCCGTTACCTGAGATATCTGCACGACGAC
ACTCGTACACTATATGAAACTTTTAGACGCGGTGTGAAAGAATCTAATAATGGCAACTGT
CTCGGTTGGCGCGAGGGACCAAATAAGCCTTATGTGTGGCAAACATACAATGAGACCCTG
CTGCGTGCCAAGAACTTCGGCTCAGGTCTTGTATGCCAAGGCCTTGTCCCGGGTCAGGGC
ACCTTTGTGGGAATATACGCACAAAATTGCCCCGAATGGATTATGGCCGAACAAGCTGCA
TATTGTTATTCAATGGTTATAGTCCCACTATATGATACCTTAGGAGCCAATGCATGTGCC
TTTATTATTAACCAAACCGAAATGTCCGTAGTAGTATGCGAAGACGATAAGAAAGCCAAT
CTTCTCCTGGACCAGTCGCCCCGGTGTTTGCGTAAACTGATCACGATAAAGGAAGTATCG
CCGTCTACACATCAAAGGGCAAAGAGTCGTGGTGTTGAAATTATTAAGTTTAGCGATGTA
GAGATTCTAGGAGCGCAGAAAGATCACCCATGTGTTCCACCAAAACCAGAAAACCTCTGC
ACAATCTGCTACACGTCTGGCACGACTGGCATGCCGAAGGGCGTGATGCTGAGCCACGAA
AATGTAGTCGCCTCAATGTGCAGTGTTACCATGCAACTAGGAGAACATCGCCCCACCAAG
AATGATGTCATGATCTCCTTCCTACCACTCGCGCATATGCTTGAGCGGTGCTGTGAGAAC
GCTCTCTATATGGTAGGCGGAGCTGTAGGTTTTTACAGCGGTGATATTAGAAGATTAGGC
GATGACCTCGCTGCACTCAAACCAACCATGATGCCAGCTGTTCCCAGACTATTAAATAGA
TTATATGATAAGGCCCAAAATGAGATATCCAACTCCAAAATTAAAAAGTTACTATTCAAT
ATGGCCTTATCAGCCAAGGAGTCTGAACTAAAGAGAGGTATAATCCGAGGCGATTCTATT
TGGGACAAACTGGTATTCCGCAAGGTCCGCGAAGGTATGGGAGGCAGATTGCGTATTATA
GTGGTGGGTTCTGCCCCGCTTGCTGGAAATGTCTTGACCTTCGCGAGATGCGCTCTTGGA
TGTCTGATCGTGGAAGGCTACGGTCAGACAGAGTGTACTGCGCCTGTCACTCTAACAGTT
CAGGGGGATCACGTGCCTGAACATGTTGGGCCTCCCGTCGCTTGTTGTAAAGTGAAGTTA
GTGGACGTCCCAGAAATGGAGTACTATGCATCTCAAGGTCAAGGCGAGGTATGCGTGCAG
GGTGCCAATGTGTTTAAAGGTTACTTCAAGGAACCGGAGAAGACCAGACAGGTCATTGAC
CAGGATGGATGGCATCATACTGGAGATGTCGGCAAGTGGATGCCGAATGGAACTTTAAAA
ATTATAGACAGAAGAAAACACATCTTTAAACTATCTCAAGGCGAATATATTGTGCCAGAA
AAGATCGAAAACATTTACATTCGAAGTCAGTACGTCGAACAAGTCTTCGTCCATGGTGAA
TCATTAAAGTCATGCGTAGTAGGTGTAGTTGTGCCAGATGTAGATGTGGTGAAATGCTGG
GCACTTGAGAATGGTATAAAGGGTACATTCTCAGCCCTCTGCGAGGACGAGCGTGTTAAA
AGCATCATTCTTGAAGATATGCTGCAGTGGGGACGCAACGCTGGCCTTAAAACTTTCGAG
CAGGTCAAAGACATATATTTACACCCCGATCCATTCTCAGTCCAGAACGGTCTTTTGACC
CCCACGATGAAAGCGAAACGACCAGAGATCAGAAACTATTTTAAACCACAAATCGACGAT
ATGTACAAAAAACTCGAATAA
Protein sequence:
MGSGKFGLSVKKEKVNMTEANKTEFSVKEKCLKLKKKLTKTEKMKTETNSKEKTIWWNQC
SSLSEIDQYLWMVGGSAGALALTGVAAASAFYLSTRPKPEKPLVTLHEQSLLETGPEMVR
VSKFYKEAKNGRYLRYLHDDTRTLYETFRRGVKESNNGNCLGWREGPNKPYVWQTYNETL
LRAKNFGSGLVCQGLVPGQGTFVGIYAQNCPEWIMAEQAAYCYSMVIVPLYDTLGANACA
FIINQTEMSVVVCEDDKKANLLLDQSPRCLRKLITIKEVSPSTHQRAKSRGVEIIKFSDV
EILGAQKDHPCVPPKPENLCTICYTSGTTGMPKGVMLSHENVVASMCSVTMQLGEHRPTK
NDVMISFLPLAHMLERCCENALYMVGGAVGFYSGDIRRLGDDLAALKPTMMPAVPRLLNR
LYDKAQNEISNSKIKKLLFNMALSAKESELKRGIIRGDSIWDKLVFRKVREGMGGRLRII
VVGSAPLAGNVLTFARCALGCLIVEGYGQTECTAPVTLTVQGDHVPEHVGPPVACCKVKL
VDVPEMEYYASQGQGEVCVQGANVFKGYFKEPEKTRQVIDQDGWHHTGDVGKWMPNGTLK
IIDRRKHIFKLSQGEYIVPEKIENIYIRSQYVEQVFVHGESLKSCVVGVVVPDVDVVKCW
ALENGIKGTFSALCEDERVKSIILEDMLQWGRNAGLKTFEQVKDIYLHPDPFSVQNGLLT
PTMKAKRPEIRNYFKPQIDDMYKKLE