DPGLEAN06072 in OGS1.0

New model in OGS2.0DPOGS213357 
Genomic Positionscaffold838:- 6387-8675
See gene structure
CDS Length633
Paired RNAseq reads  762
Single RNAseq reads  2173
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitND
Best Drosophila hit  vacuolar protein sorting 28 (3e-82)
Best Human hitvacuolar protein sorting-associated protein 28 homolog isoform 1 (4e-76)
Best NR hit (blastp)  hypothetical protein AaeL_AAEL002324 [Aedes aegypti] (3e-89)
Best NR hit (blastx)  hypothetical protein AaeL_AAEL002324 [Aedes aegypti] (7e-86)
GeneOntology terms





  
GO:0005575 cellular_component
GO:0030036 actin cytoskeleton organization
GO:0007291 sperm individualization
GO:0048749 compound eye development
GO:0005515 protein binding
GO:0009792 embryo development ending in birth or egg hatching
GO:0010797 regulation of multivesicular body size involved in endosome transport
InterPro families

  
IPR007143 Vacuolar protein sorting-associated, VPS28
IPR017899 Vacuolar protein sorting-associated, VPS28, C-terminal
IPR017898 Vacuolar protein sorting-associated, VPS28, N-terminal
Orthology groupMCL12272

Nucleotide sequence:

ATGCAAGATACGAGACCAGAGTTATATGAGGAGGTGAAGCTGTACAGAAATGCCAGGGAG
AGAGAAAAGCATGACAACATGGCCGAACTCTATGCTGTGGTCAGCACCCTTCAACATCTA
GAAAAAGCTTACATGCGGGACTGTGTGCGTGCACAGGAGTACACTGCTGCCTGCAGTCGG
TTACTCGTACAATACAGAGTAGCCTTCAAGCAAGTTACCGGAGAAGAGTTCCCAAATATT
GAGGCATTTGTTACAAAATTCAGGTTAGATTGTCCGGCGGCATTAGAGAGGATAAGGGAG
AACAAACCAAACCTGATTAAAGATGACAAAGGGAACACTAATAAATATATCGCTGAAATT
GTATCGCTGTTCATAACGTTGATGGATAAGTTGCGCCTGGAATTCCGCGCCATGGACATG
ATCCAGCCAGAGTTACGTGACCTCCGGGACACCATGGAACGTCTCACCATGCTGCCTGAT
GACTTCGAGGGGAAGCTCAAGGTCCAAGAATGGCTGGACAAGCTGTCGGAGATGTCGGCT
TCAGATGAACTATCAGAGTCCCAAGTGCGACAGCTGCTGTTTGACCTGGAAACTTCATAT
GGAGCGTTCAACAAACTACTCCACAAGGATTGA

Protein sequence:

MQDTRPELYEEVKLYRNAREREKHDNMAELYAVVSTLQHLEKAYMRDCVRAQEYTAACSR
LLVQYRVAFKQVTGEEFPNIEAFVTKFRLDCPAALERIRENKPNLIKDDKGNTNKYIAEI
VSLFITLMDKLRLEFRAMDMIQPELRDLRDTMERLTMLPDDFEGKLKVQEWLDKLSEMSA
SDELSESQVRQLLFDLETSYGAFNKLLHKD