| New model in OGS2.0 | DPOGS213376 |
|---|---|
| Genomic Position | scaffold838:+ 72998-76953 |
| See gene structure | |
| CDS Length | 1830 |
| Paired RNAseq reads | 1477 |
| Single RNAseq reads | 4368 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009122 (0.0) |
| Best Drosophila hit | CG11123 (1e-90) |
| Best Human hit | pumilio domain-containing protein C14orf21 (1e-24) |
| Best NR hit (blastp) | GI18760 [Drosophila mojavensis] (1e-111) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC010059 [Tribolium castaneum] (1e-107) |
| GeneOntology terms | GO:0003723 RNA binding |
| InterPro families | IPR011989 Armadillo-like helical IPR001313 Pumilio RNA-binding repeat IPR016024 Armadillo-type fold |
| Orthology group | MCL13723 |
Nucleotide sequence:
ATGGGAGAAGAATCTGTTGATAATAATCCTCTCAAAAAGAAGCAGAGGAGGAAACGAAAG
AATTTCTTGTCCAACGCCAAAAAATACGCTAAAAAAGGACAAATGGGTAGAGGGACTAAG
ATCCCTGAAGAACTTTATCAATATTTTGTTGGTATTTTGGATGTCATCAAACAAGGAGTG
GAGAATCCGGAAGAGAGAGAAGCCCTTGTCAACAATGTTTTGGAGAGAACTAAAGGGGAA
GAATTAAATGTAGTTGGTAACCAGCTGGGATGTCGTATGGTGGAGATCCTCCTACCCTAT
TCTTCAGCTGAAGATCTGGAACGTTATATCGAGGTACTATCACCGGAACTGCGACCGTTA
TGTTCAGACAACATTTCAAGTCATGTGGTGGAAACATTACTTAGAGTGGCCTGCGAGAGA
GCTACAGAGCATTTACAAATAAGTGATGAAGAAAAAGTTCCCAAGAAAAAGAAAAAAGTG
GAACCCAAGTACAAAGACGACCACATAAAAAAATGTAATGAATTCACATTGAAGATATGT
AAATATGCACTAAATAATTTGGAAGACTTCGTCTGGGATAAATATGCCAATCATATTTTA
CGCAGTGCTATCAAATGTCTCAGTGGCATAACACTGCTGCCGGGAGAGAAACCTAAAGTT
AATATGTTCAGGGAAACAGTAAACCAAAATAAAGGAATACCTCCGCATCTGACGGAGTTG
AAGTACAAAGAAGTTCCTGAAGAATATAAAGACATTGTTAAAGAATTCGCTAACAGATTG
TCTTCGTGGCCTCAATTTAAGGACCTGCCGAATCAAAACATAACATCGGCATTGTTACAA
GTGTTATTATACGCTGTTAAGAATGTCGATGCAAATATATGCAAGAGTTTAGTCAACAAG
TTGCTGAACGAAAGCTTTGCTCCAGAAGATTGGGTTCCGACGGGTGAAGATGAGAAAAAA
GATCAAAAAGATCAGAAGACTGTTGACAATGAAGCTGATGTTGCATCATCAGACTGTCCT
CTGCCTCCAGTTTTCAAAACAGAATCGTCAATATACGCCCGCTGCTTCATCAATCGCCTC
GCTAAACTCTGCACTATGTCCATGTTGAATTTCACCGTACAGAGACTCATAGACAACTGT
CAGATCAAAGAGGAATTTGAACCAATGTTTGAAGAGCTATCGAGTCAGTTCAACTCCATA
CTGTCGTGTGGAAACACTGGTGTGTTGGTGGCTCTAGCTAAAGGATGTCTGCGGGTCAAG
GCTAAGCAGATGCAGATGATGAACATGTTGGAGACGGTCCTCAACTGTTCGGAAGCTGAA
CCGAAGCGTTTCATAATCCAATGTTTGCGACTGGTTCCTCTCAGTGACAAAACAATGGAC
ACTACCAATTATTTTATACACGTCCATGGATCAGTGATAGTTCAGACGATGCTCGGATTC
CAGCGTCCCGCCAAGCTGGTGTCCAGTATACTGGAACTGTCCTCGGAGGAGTTGGTTTAC
ATTCTGTGTGATCCCAAGGGCTGCCACATCGCTGATGCCTTCACCACACAGAATCTGGTT
GGAGTAAAGGCCAGGGATAAAATGGTGTGGAAGTTGAAGGGCTACTATCAAAACATGGCT
ATATCTCAGTACGGTTCGCGAGCTTTCGAACAGGTCTTCGAAGCGGCATCCATGGAGCAG
AAAGTGAAAATAATGAAGGAAATGTCAGACAAGAGCAACTTACTGAACACCACCAGCTAC
GGACGACTTATAGCCACCAAACTTGATATCAGTACATTCAAGGCTTCACAGAAGAAGTGG
GAACAGAGCAGGACCGAGAAACCTGAATAA
Protein sequence:
MGEESVDNNPLKKKQRRKRKNFLSNAKKYAKKGQMGRGTKIPEELYQYFVGILDVIKQGV
ENPEEREALVNNVLERTKGEELNVVGNQLGCRMVEILLPYSSAEDLERYIEVLSPELRPL
CSDNISSHVVETLLRVACERATEHLQISDEEKVPKKKKKVEPKYKDDHIKKCNEFTLKIC
KYALNNLEDFVWDKYANHILRSAIKCLSGITLLPGEKPKVNMFRETVNQNKGIPPHLTEL
KYKEVPEEYKDIVKEFANRLSSWPQFKDLPNQNITSALLQVLLYAVKNVDANICKSLVNK
LLNESFAPEDWVPTGEDEKKDQKDQKTVDNEADVASSDCPLPPVFKTESSIYARCFINRL
AKLCTMSMLNFTVQRLIDNCQIKEEFEPMFEELSSQFNSILSCGNTGVLVALAKGCLRVK
AKQMQMMNMLETVLNCSEAEPKRFIIQCLRLVPLSDKTMDTTNYFIHVHGSVIVQTMLGF
QRPAKLVSSILELSSEELVYILCDPKGCHIADAFTTQNLVGVKARDKMVWKLKGYYQNMA
ISQYGSRAFEQVFEAASMEQKVKIMKEMSDKSNLLNTTSYGRLIATKLDISTFKASQKKW
EQSRTEKPE