| New model in OGS2.0 | DPOGS210669 |
|---|---|
| Genomic Position | scaffold2883:+ 143-10743 |
| See gene structure | |
| CDS Length | 3375 |
| Paired RNAseq reads | 2086 |
| Single RNAseq reads | 5529 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006250 (2e-13) |
| Best Drosophila hit | Cad99C (0.0) |
| Best Human hit | protocadherin-15 isoform CD1-1 precursor (5e-69) |
| Best NR hit (blastp) | PREDICTED: similar to cadherin [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to Cad99C CG31009-PA, partial [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0016339 calcium-dependent cell-cell adhesion GO:0005887 integral to plasma membrane GO:0007156 homophilic cell adhesion GO:0048100 wing disc anterior/posterior pattern formation GO:0016021 integral to membrane GO:0005509 calcium ion binding GO:0007155 cell adhesion GO:0007224 smoothened signaling pathway GO:0007304 chorion-containing eggshell formation GO:0005902 microvillus GO:0032529 follicle cell microvillus organization GO:0032533 regulation of follicle cell microvillus length GO:0016324 apical plasma membrane GO:0007305 vitelline membrane formation in chorion-containing eggshell |
| InterPro families | IPR002126 Cadherin IPR020894 Cadherin conserved site IPR015919 Cadherin-like |
| Orthology group | MCL12011 |
Nucleotide sequence:
GGTCCCGGAGATCCGATACCGGCCTACAAATTTGAGTCAACGACAAGCTTCTTTGATATC
GACAAAGACGGGTACCTCGTAGTTAGCGACGATAGATTAGATCGCGACCCACCAAACAAA
GATAGACTTAGATTTCAGGTGGTGGCTCGCGAACCGACGGGGGCGGCGTCACCGCCTTAC
TCGCTCTCCGTGGAACTGCTTGATGTTAATGACAACGCTCCAGTTATACCAAAAACACAG
CCAATCACCGTACCAGCCAGCCTCGAACCAGCCGCTGTGTACAGGGTGGAAGCTACAGAC
ATAGACGAGGGTGAGAACGCTCGTATCAGTTACAGTATATACCACGTGTCTAACAACGGG
GGTAACAAGTTCACTATAGATCCAAACACTGGTGTTATATCGAGCACCGGTCGTCTACAA
GCTGGTGAACAGTACAGTGTCACAGTGAGGGCCGCTGACTCGAAAAGATTGAGTTCCCAA
GGCATCATTGAGCTAGTGGTAGCCCCCGGACCCAATACACGCCCACCACAATTCAGTTCA
AGGGATTACTTCGCACCGGTGTCTGAAGGAGCCGCTATCAACTCAACTGTTACCACCGTC
ACAGCCAAAGATCCTGAGAATGAACCTGTTACATACTCAATAGCGTCTGGGAACGATCTG
CGTCAATTCGCCATCGGCTCCAACACTGGCATCATAACAGTTATAAGACATTTAGATAGA
GAAGTACTCACGAGGTATCAGCTGATGATAAGAGCCGAAGATCCAGGACACTTGTCAACA
ACAGCTACGGTTAATATTAAAGTCACTGACATTAACGACAACAACCCAAAGTTCGACGAG
GATTCCTATTTGTTTAAAATTAAAGAAGGAGTAGCAAACGCTGAAGTGGGCCAAGTACAT
GCTACTGATTTAGATGAAGGTGTGAACGCTATGATCACTTACAGCATCCCGTCACATCTG
CCGTTCGCTATAGATAACTCTACTGGCGTTATAAGTACTGTAACAGAACTTGACTATGAG
GATACTAAGGAGTATGCATTCGTTGTGACAGCTACTGATGGTGCGATGGACAAACGTCTG
GGCACGGCCTCTGTATCAGTTTTAGTGTTGGATGAACCAGACGAGCCCCCGGTCTTCACA
CAAGGAGTGTATTCAGTTAGAGTGCCAGAGAACGCACCAAATTATCCAGTGGTTAAAGTA
CACGCCGATGATCCGGATACCCAACCGGAGATAACCTACACTATTATAATGGGAGACACC
GATTTATTCTCCATCGACCGTAAGACCGGTCTTATTAGGACATTGAAGCCGCTCGACAGA
GAGGAGTCGGCACGCCATGAGCTCATAGTGGGCACTGAGGAGAATAATAGTGATGGAAAT
GGATCTACAGCCACTGTTGAAGTTGTTGTTGATGATAAAAACGATAACGCGCCCATATTC
ACGTCTGTGGCTCGTCCGGTTACTATAGAGGATACGTCCTCTATAGGCAGTTTGGTTGAG
ACGGTGGTGGCGTTGGATTCGGATGCTACATCACCTAACAACCGTATACGGTATGCGCTC
GCCGGACGAGGGAAAGCCAGTATATACTTCCACGTGGAACCGGATACGGGAGCTGTGAAA
GTTAGAGACGATTTAAGAAAAGAGACTGATAGCGAATATACCGTTGATATCCAAGCGTAC
GACCAGGGTGATCCGGTGATGTCTTCTGTTATGAGTCTCACTGTCTATGTCAGTCACTCG
GCCACCGTACCACCTGATGTTCGCCTCGGCTTCCCGGACACTGTGTACACGGAGCACTTG
GCGGAGAACTCTCCCAACTCAACGATTGTAAGGACGTTGCCGATATGGAACAAGAACAAG
CATTCAAGAGACACTCCCCTCAAGTGCTTACTCACAGATGCTTCACAGAAAGGAGTGTTT
TACGTGAGACTTACAGTCGACAGAGACTGCGCTATATACCTCAATAGTAGTCTAGACTAT
GAAACACTAACAGAATACTCATTGGAAGTCCAGCTGGAGTCCATACAGGGTCTGATAAAC
CCAGAGAGCAGCAAAGCGGTTATTAAAATTCATGTAACCGATGTCAATGACAACGCTCCT
GTTTTCGTATTTAATGAGCAGTCTACGGTGGGCGGTGCGAAGGGTAAATATTTCGCAATA
GCCACTAAGGATATGCCGTTGGGTACCAATTTACTGCAAGTTAAGGCTAAAGACAAGGAC
AGTGGCGACTTCGGTAAAATAGAATACCGCAAAAACTCATGGACCAAAGCAGCCGAGGAA
TACTTCTCGTTAGACCCTGACACCGGCGTCATCAGTAATAGGAAGACATTCGAAAATGTC
CCAAAAGACGTATTACCGTTCAAATTCAACGTTATGGCGAGGGACAACCCCAAGTCTGAT
AACTATAAGATAGCTCGAGCTTCTGTCGTGATAAATCTGCTTCAAAAAGACAATCAGCTT
ATCATAGAAGTCGGTAACCTGAACGTGGATACAATGACGACTCAGCAAGCCCGTAGTCTG
CTCGCATCTGTTGAGGAAAGAAGTGGTTTAGTGGCAGGACTCGAGAAATTGACTCCTAGA
CTATATTTGGGAGAAAATGGTACTTTAGAGAGCGACCCCAACGGAACCAGTGTCTGGTTG
TACTTGTTAGATCCGAATACTGGCGAAATATTGACAAGAGAATCACAGCCGGTGAAAAAG
GCGGTGGAGTCTGGTGTGTCAATCCGATACAAGAAACACAAAGAGCAAGCAATACAACAA
TACGGAACCCTAAGCATGAGTATGGCGCCGCCGCGGCCACCGTCAGGGTATGAGTCTAGT
GAGGAAGACCCCGCTCCCAGATATGAAACACAGGTTCTCAATATGGCTGTCGATGACGCG
GACCTACAATTGGACTTTAGTCCGAATAACCACGCATTCAACATTCACAATGTTCAGTAT
TTATCCAAAGATAACGGCGAAAGAAGTCCAACACTATCAGAAACAGCGACTACCGCGAGA
GCGTCGAGCATCAACGAGAACGGCGGTACCTTGAACAAAGTTCATAACTTCGACAACAAC
GCCAACAACGCGACCGTCGCTCGGAACACGCAGACGTTGAATCGGCGGACCAACAACAAC
CATCCCCTGAATAACTCGCTGGGGACGCTACCCCGGGTCAATAATAGTGTAGCGGGGGGA
CTGCTGGCCGCGACGCTGGGTAGGAAAATCAACACCGGCAACCACAAGAAGAAACAGACG
CAACCCATTATGGCGTACGACGAAATACCCGGGTTACAACGATCCACGGATAATGATAAT
GTTACGTTCGGAAAGAGAAATTTCACTGGTTTCTCATACGAACAATCCCCCGTGGAAACT
ACCACAGAGCTATAA
Protein sequence:
GPGDPIPAYKFESTTSFFDIDKDGYLVVSDDRLDRDPPNKDRLRFQVVAREPTGAASPPY
SLSVELLDVNDNAPVIPKTQPITVPASLEPAAVYRVEATDIDEGENARISYSIYHVSNNG
GNKFTIDPNTGVISSTGRLQAGEQYSVTVRAADSKRLSSQGIIELVVAPGPNTRPPQFSS
RDYFAPVSEGAAINSTVTTVTAKDPENEPVTYSIASGNDLRQFAIGSNTGIITVIRHLDR
EVLTRYQLMIRAEDPGHLSTTATVNIKVTDINDNNPKFDEDSYLFKIKEGVANAEVGQVH
ATDLDEGVNAMITYSIPSHLPFAIDNSTGVISTVTELDYEDTKEYAFVVTATDGAMDKRL
GTASVSVLVLDEPDEPPVFTQGVYSVRVPENAPNYPVVKVHADDPDTQPEITYTIIMGDT
DLFSIDRKTGLIRTLKPLDREESARHELIVGTEENNSDGNGSTATVEVVVDDKNDNAPIF
TSVARPVTIEDTSSIGSLVETVVALDSDATSPNNRIRYALAGRGKASIYFHVEPDTGAVK
VRDDLRKETDSEYTVDIQAYDQGDPVMSSVMSLTVYVSHSATVPPDVRLGFPDTVYTEHL
AENSPNSTIVRTLPIWNKNKHSRDTPLKCLLTDASQKGVFYVRLTVDRDCAIYLNSSLDY
ETLTEYSLEVQLESIQGLINPESSKAVIKIHVTDVNDNAPVFVFNEQSTVGGAKGKYFAI
ATKDMPLGTNLLQVKAKDKDSGDFGKIEYRKNSWTKAAEEYFSLDPDTGVISNRKTFENV
PKDVLPFKFNVMARDNPKSDNYKIARASVVINLLQKDNQLIIEVGNLNVDTMTTQQARSL
LASVEERSGLVAGLEKLTPRLYLGENGTLESDPNGTSVWLYLLDPNTGEILTRESQPVKK
AVESGVSIRYKKHKEQAIQQYGTLSMSMAPPRPPSGYESSEEDPAPRYETQVLNMAVDDA
DLQLDFSPNNHAFNIHNVQYLSKDNGERSPTLSETATTARASSINENGGTLNKVHNFDNN
ANNATVARNTQTLNRRTNNNHPLNNSLGTLPRVNNSVAGGLLAATLGRKINTGNHKKKQT
QPIMAYDEIPGLQRSTDNDNVTFGKRNFTGFSYEQSPVETTTEL