| New model in OGS2.0 | DPOGS203521 |
|---|---|
| Genomic Position | scaffold703:- 16858-25859 |
| See gene structure | |
| CDS Length | 1542 |
| Paired RNAseq reads | 1681 |
| Single RNAseq reads | 4264 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004349 (4e-77) |
| Best Drosophila hit | d4, isoform C (8e-55) |
| Best Human hit | zinc finger protein ubi-d4 (2e-45) |
| Best NR hit (blastp) | requim, req/dpf2, putative [Pediculus humanus corporis] (8e-106) |
| Best NR hit (blastx) | PREDICTED: similar to d4 CG2682-PA, isoform A [Apis mellifera] (1e-59) |
| GeneOntology terms | GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005634 nucleus GO:0045449 regulation of transcription GO:0005515 protein binding GO:0008270 zinc ion binding GO:0048813 dendrite morphogenesis GO:0007517 muscle organ development |
| InterPro families | IPR013083 Zinc finger, RING/FYVE/PHD-type IPR019787 Zinc finger, PHD-finger IPR007087 Zinc finger, C2H2-type IPR011011 Zinc finger, FYVE/PHD-type IPR001965 Zinc finger, PHD-type |
| Orthology group | MCL11889 |
Nucleotide sequence:
ATGGCGGCCGCAGAGATTCAAGTTGTAAATTCATCTAATTTAGCGAAAATTGAAAGTTTT
CTCAATGACCCCAGCTACAAGGAAATTATTGAAAACTCATCTACATTCAATTCGCGACTA
TGCGCCGAACGGAGAATGCGGATGCCGTTCATAGACACACAGACAGGTGTTGCCCAGAGC
CATTCAAATTTATTTATGACAAGGAAACAAAGAATGCCAGGTGCCAGAGAGGGTCAGCTA
TACACATATCCATCACAGAGATGGAGAAAAGCCCGTCGTCAATACCTTACTATGTCATCA
ACGAGGTGGGGCTGGAGTGCAGCAGATGCAGCTGATAATATCGGGGAAGGTGAAAACAGT
TCAGGTATACCCGACGGTTTGGTCGGCGAGGACAGTAGAGATGGGTCACAGAGTGCGGCT
AAGGATGACCCCAAGGAATGGTTCTATGACGAGTTAGCGATGGAAGAAATGGAGACTGGA
GAGGAGCCGGACCCTGAATCAGATGAGGATTACTATGACGACACATACGCCAATCGCCGT
AAGAGACGAGGAGCCGCGCCATCTGGCCCGGGCTCCCGTGGCGGGCGGGTCAGGAAGTCC
CAGCCTGATGACACACCAGTCAAACGGGGGCGAGCGGGTCGCGGTCGCAAACGTGCTGGA
GTACCCGCCCTCTTGCCGTACGAAGTCCCCGGTGATAGCGAGAAGCCCTACGGATGTGAA
CTGTGCGGGGCGAAGTACAAGACGCGGCCGGGCCTGACGTACCACTTCACGCACACGCAC
AAGGACGCGGCGGGCAGCGACAACGACTCCAGGGACAGTAGGCCCGCCACCTCGCCCGCC
GCCGCCGCCGACTATCAAGACAGTTATGTCACATTCCTTAATAACCCCACGGGGAGCGCC
TCCATGGCGGCCCCCCGTCGGCCGAGTCCGCCGCCGCGGCCCGCGTCGGCCGACACGTCG
TCCTCGGACTCCGCCCTCGCTCCGCTGGTGCCCCCCGCGTCCTCGCCGGCCCCGACCCCG
GCCTCCGCCCCCGCACCCGCCACCAGCAGTGCCGACCTCAAGGATCTCAAGGAACCCGAC
ACTAAGTTGTTCCTGAAGAGCTTATACCTCCATACACACTACCCACCTCCGCGACTGTCG
CGTGGTGCGGTCACACAGCAGATCAGCGTGAGAGTACAGCTGCCTCGTGTATGCTTCCAG
GTGTCGCCATCCCCGTACTGCGACTTCTGTCTGGGCGACGACCGCGAGAACAAGAAGACG
GGCACTCCCGAGAGGCTGGTCAGCTGCTCCGACTGCGGCCGCTCAGGTCACCCTACGTGT
CTGCAGTTCACCGTCAACATGATCGTGTCGGTGCGCAAGTATCGCTGGCAGTGCATCGAG
TGCAAGTGCTGCTCCGTGTGCGGGACCAGCGACAATGATGACCAGCTGTTGTTCTGTGAT
GACTGCGACCGCGGCTACCACATGTACTGCCTGGCGCCGCCGCTGGACGCGCCGCCCGAG
GGTTCCTGGTCCTGCGCCCTCTGCATCAAGGAGTTCCACTGA
Protein sequence:
MAAAEIQVVNSSNLAKIESFLNDPSYKEIIENSSTFNSRLCAERRMRMPFIDTQTGVAQS
HSNLFMTRKQRMPGAREGQLYTYPSQRWRKARRQYLTMSSTRWGWSAADAADNIGEGENS
SGIPDGLVGEDSRDGSQSAAKDDPKEWFYDELAMEEMETGEEPDPESDEDYYDDTYANRR
KRRGAAPSGPGSRGGRVRKSQPDDTPVKRGRAGRGRKRAGVPALLPYEVPGDSEKPYGCE
LCGAKYKTRPGLTYHFTHTHKDAAGSDNDSRDSRPATSPAAAADYQDSYVTFLNNPTGSA
SMAAPRRPSPPPRPASADTSSSDSALAPLVPPASSPAPTPASAPAPATSSADLKDLKEPD
TKLFLKSLYLHTHYPPPRLSRGAVTQQISVRVQLPRVCFQVSPSPYCDFCLGDDRENKKT
GTPERLVSCSDCGRSGHPTCLQFTVNMIVSVRKYRWQCIECKCCSVCGTSDNDDQLLFCD
DCDRGYHMYCLAPPLDAPPEGSWSCALCIKEFH