| New model in OGS2.0 | DPOGS213610 |
|---|---|
| Genomic Position | scaffold6077:+ 3434-5242 |
| See gene structure | |
| CDS Length | 1809 |
| Paired RNAseq reads | 151 |
| Single RNAseq reads | 545 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011804 (5e-99) |
| Best Drosophila hit | Gemin3 (4e-38) |
| Best Human hit | probable ATP-dependent RNA helicase DDX20 (8e-46) |
| Best NR hit (blastp) | PREDICTED: hypothetical protein [Nasonia vitripennis] (3e-63) |
| Best NR hit (blastx) | DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus corporis] (2e-59) |
| GeneOntology terms | GO:0008026 ATP-dependent helicase activity GO:0005524 ATP binding GO:0000166 nucleotide binding GO:0004386 helicase activity GO:0003676 nucleic acid binding GO:0016787 hydrolase activity |
| InterPro families | IPR014001 DEAD-like helicase IPR001650 Helicase, C-terminal IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal |
| Orthology group | MCL12337 |
Nucleotide sequence:
ATGGGAGGGCTACCAGTACAAGATGATATAGAAAAATTTAAAAATAATAATGTTCATGTT
GTAGTCGGGAGTCCAGGTCGTTTAAGGCACCTTATACAAAATAAACATATAGATATCTTA
GGAGTGAGACTGCTTGTTCTGGATGAAGCCGATAAGTTAATGGAGAAAAGCTTTTTACCT
GATATAAAGTATATCCACATGGTTCTGCCAAAACAAAAACAAGTTATATTGAGTAGCGCC
ACCTATCCAGATGAGATAAAAGAATTTATAGGGCAATTTGTGCAAGATCCTCAACACTTA
TGCCCTAATAACAACTGTGTACTATTAGGTGTTGTACAAAAAATAACAACTGTAAAATAT
AATAGTAACATCATAAGACAGACAGAGTTTAGATTCCAAGAACTCTTGAAAATATTAACT
AAAAAACATTTCAAGCAATGCTTAGTATTCTGTAACTATCAGGGAAGAGTCAGTGAAGTA
CATAAATTATTAACAAAGGCAAAGTGGCCCTCTGAACAGTTGTATGGCAACCAAGATCAA
ATGGACCGGCTAGACGCCATCAAAACATTACAGGAATATAAATGCAGGATTTTGATATCA
ACTGATCTAGCTGCTAGAGGTATAGATGCATCAAATGTAGATTTAGTGGTGAATTTTGAA
CCCCCCTATGAGTGGCAAACATATTTACATAGAATTGGTAGAGCTGGTAGGTTTGGCTCT
TATGGCATGGCAGTTACCATACTGAGTGAAGGAGCAGAACATAAAAAGTTCTTAAATTTA
TTAGATTCCATGAAATTAGGTAAATTAGAGTGTTTTTGGGATGACGATGTGATAAACGAT
GACAACAACAGGAATTTAAAAGACTCGGAAAATATTATTGCACAGAACGCAAAATGTACT
AATGGCAATTATGAGGAGCTGTGGAATATTTTATGTGGAGATGATAAAGTTACAAACGGG
GAAGACATAAAACTAGAAAGCTTCGATGAACTTTTGGATTCCTTACAAAACAATAAAGTA
GAATCTAACAACGGACCGGAAACATTTCATAGTTTACTCGATTCTTTTAATAATGAATCG
CTTTCAAGAGGCTTGGATGTCAAATATAAAAATATTTGCATTCCAAAAGAATTTTGTCAA
AATTTAAATTTATCTTTAGCTTTCAATGGAAAGTCATTGGACAATCACATGGTAGAGAAT
GTGACAAGGGAAATTGAAGAAATCAAAGCTGACAACTGCAATAATGACGAACTAAAATTA
GTGTTAAAAGAGTCGGATAACAAAAACAATTTTGAGGTGCATTGTGACATTAATTTTAAT
TCCACTGACGACCTGGGCCATAATGAGAACGATGTGATGAAAAATTCTTCAAATATTCCT
GAAAATGCCACTATTACATGTAACAACGACAGCGTTTGGAACTCGAATATGGAATTCGAA
AAATTACAATTGCCAACAGCTTTTTCTAATGGAAAAAACATTTATTCGGAAAAGAAGATC
TCAAAAAAGGTTAAATTCCCCCACAATAAGAAAATCATTGAAAATATTTCAGATTTCCCT
GGTAATTCATATAAAACCACGAAAATGTCATCAAAGAAATCTGAAGACTCTTTAATATAT
AATGAAGACGTAAATTCAAATTGCAATTCGAAATATATGCACAAAAATAAAAATCGGAGT
AAAGAAGACCAATCGAGTAAAAAAATTTATAACCAGAATCAGTCATATGAACATTGGTAT
AACCAATTAAAAGTTAGGGTTAAGTATTTCGAAGCAGCATTGTATATAGAGGAACTAAGT
AGAATGTAA
Protein sequence:
MGGLPVQDDIEKFKNNNVHVVVGSPGRLRHLIQNKHIDILGVRLLVLDEADKLMEKSFLP
DIKYIHMVLPKQKQVILSSATYPDEIKEFIGQFVQDPQHLCPNNNCVLLGVVQKITTVKY
NSNIIRQTEFRFQELLKILTKKHFKQCLVFCNYQGRVSEVHKLLTKAKWPSEQLYGNQDQ
MDRLDAIKTLQEYKCRILISTDLAARGIDASNVDLVVNFEPPYEWQTYLHRIGRAGRFGS
YGMAVTILSEGAEHKKFLNLLDSMKLGKLECFWDDDVINDDNNRNLKDSENIIAQNAKCT
NGNYEELWNILCGDDKVTNGEDIKLESFDELLDSLQNNKVESNNGPETFHSLLDSFNNES
LSRGLDVKYKNICIPKEFCQNLNLSLAFNGKSLDNHMVENVTREIEEIKADNCNNDELKL
VLKESDNKNNFEVHCDINFNSTDDLGHNENDVMKNSSNIPENATITCNNDSVWNSNMEFE
KLQLPTAFSNGKNIYSEKKISKKVKFPHNKKIIENISDFPGNSYKTTKMSSKKSEDSLIY
NEDVNSNCNSKYMHKNKNRSKEDQSSKKIYNQNQSYEHWYNQLKVRVKYFEAALYIEELS
RM