| New model in OGS2.0 | DPOGS215671 |
|---|---|
| Genomic Position | scaffold9979:+ 2606-3934 |
| See gene structure | |
| CDS Length | 786 |
| Paired RNAseq reads | 5385 |
| Single RNAseq reads | 18638 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003580 (2e-52) |
| Best Drosophila hit | CG3355, isoform A (3e-26) |
| Best Human hit | transmembrane protease serine 11F (5e-23) |
| Best NR hit (blastp) | RecName: Full=Trypsin CFT-1; Flags: Precursor (3e-66) |
| Best NR hit (blastx) | trypsin [Choristoneura fumiferana] (9e-65) |
| GeneOntology terms | GO:0004252 serine-type endopeptidase activity GO:0006508 proteolysis |
| InterPro families | IPR001254 Peptidase S1/S6, chymotrypsin/Hap IPR001314 Peptidase S1A, chymotrypsin-type IPR009003 Peptidase cysteine/serine, trypsin-like |
| Orthology group | MCL18146 |
Nucleotide sequence:
ATGCGTGTTACGGTTTTATTATTTGCGAGCTGTCTAGCTGTGGCAGCAGCACTGCCGCCA
GCTGTCAGAATCGCAGGTGGATCGAACGCAGCAATTACATCATACAGATTTGCTGCAAGT
CTTTTGTATTCTAGAGTTGGCGTTGGTACTTTTATATATGGCTGCGGTGGGTCAATCATT
ACCAACAGAGTGATTCTGACTGCTGCTTATTGCCTTCACAATGAACCTGTATATCGTTGG
CGTGTTCGTGTTGGTTCAGCCAGGTCCAGCACTGGGGGAGTCGTTCATAATACTCTGAGA
ACAGTAGTTCATCCAAATTATAATCCACGGACTGCTGACAGTGACATTGCTTTATTGCAC
TCAATGACAGTTTTCGTTTTCAACAATAACGTGAATTCAATAGGAGTTCCCAGCGTTAAT
TACAACCTGCCTGACTATCAACCCGTAACAGCTCTCGGATGGGGAGCTACCAGTCACGGT
GGTCAACTCTCTGATAGGCTCCGTCATGTTGACATTTGGACAGTCAATAGAAACGTTTGC
CGGACGCGTCATTCTGAGTTGGGATACAGCATTACCGACAACATGCTATGTGCTGGTTGG
CTGGATGTCGGAGGTCGTGGCGCTTGCATTGGTGATACTGGCAGCGCTCTCATTCACCTT
ACCGGCAATGTTCAAACTATTGTTGGAGTGTACTCGTGGAGTTACAATTGTGCACTTCCT
CGATACCCTAGCGTCAACACATTTGTTCCTAGATTCACTAACTGGATTGTAGCTAATGCA
AATTAA
Protein sequence:
MRVTVLLFASCLAVAAALPPAVRIAGGSNAAITSYRFAASLLYSRVGVGTFIYGCGGSII
TNRVILTAAYCLHNEPVYRWRVRVGSARSSTGGVVHNTLRTVVHPNYNPRTADSDIALLH
SMTVFVFNNNVNSIGVPSVNYNLPDYQPVTALGWGATSHGGQLSDRLRHVDIWTVNRNVC
RTRHSELGYSITDNMLCAGWLDVGGRGACIGDTGSALIHLTGNVQTIVGVYSWSYNCALP
RYPSVNTFVPRFTNWIVANAN