New model in OGS2.0 | DPOGS212285  |
---|---|
Genomic Position | scaffold399:+ 25764-35008 |
See gene structure | |
CDS Length | 2049 |
Paired RNAseq reads   | 2127 |
Single RNAseq reads   | 6150 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011445 (1e-42) |
Best Drosophila hit   | CG31211, isoform B (5e-06) |
Best Human hit | splicing factor, arginine/serine-rich 18 (2e-09) |
Best NR hit (blastp)   | PREDICTED: similar to CG31211-PA, isoform A [Apis mellifera] (6e-52) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC011125 [Tribolium castaneum] (3e-34) |
GeneOntology terms    | GO:0005634 nucleus GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
InterPro families   | ND |
Orthology group | MCL17180 |
Nucleotide sequence:
ATGTTCTCTAGCAAAGATGCCGTAAATCCAGGATATCCCACGCAGTGGGCTTTAAATCCA
ACTGCATATCAAAATATAGATTCAAGCCAAGTAGATTGGGCAGCTTTAGCACAACAATGG
ATTGCTATGAAAGAAGCCGCGGTGATTGTGTCAACGCCACAGTCAAAAGCCGATGTGGAA
GAGGGCGAAGCACCTATGGAAGTAGAAAATCCAGAGGCCAGCGAACCACCTATCGGTGCA
GGCCCCGAGTGGAATGGCTCAACGAACTCATGGGGAGGTTCTTGGAACCAGTGGGGATGG
GGTTGGAGTGGCACAGGACCAATGGATCCTAAAATGGCTAGTGATCCATCAATAGCCATG
GGTCCAATGATGGATAGCTATCCCGTAGCAGATAACAATACAACCATGCCAGGTTACACG
AGCGGTGCTGTGCCGACTCCAACATTTCAACATGGTTATTGGACGGCTCAAAACTCTGAC
CAGTCGGGCAATAACCGGAATCGCGATAGGAGATCTAAGAGCAAAACTAGAGAAATTAAA
CCTACCAGAAGTAGATCACATAGAGATAAGTTACCTTTAATACCACCTGTGATGGAACCG
CTGGTTATGCCGACTCCGACATCTACTATTGACGCAGCTAAGAGACGACAGCTACCGGCT
TGGATAAGAGAAGGCTTAGAGAAAATGGAACGAGAGAAACAGAAAGCAATAGAAAGGGAA
CAGGAGAAGAAAGCGAGAGAGGAAGCGGAGAAGGAGAAGAAGAGGATTGAAGAGGAAGAG
TTGCAGAGGCTGAGGGACGAGGGACATACTGTGCTGCCGGCCAAGAGCAAATTCGATTCA
GACTCCGAGGGCGAAGCTCCCCCTCCCCCTCCCGCTGTCATTCCTCCGCCCCTGGGACGA
AAATCAAAAGAGGAGGCTCTTCAGGATGTGATGTTAGCGGTGCGTCGTTCGCTAACAGAG
ATCCTGTTGGAGGTCACTGACAGCGAGATACAAACGGTGAGCCAGGAAGAAGTGGCTCGG
TATAACGCCGCACAAGCGTCGCGACTCAACGCTATGAAGGCGAGCAAGTCCAAGGCGCTC
GCGTCCATCGCCAGCGGTCTCGGTCTTGGAGCGTACGAGAGCAGCGAGGACAGCGGCGAC
GAAGACCAACACGATATGTCCGACCAGCAGTTACAGGAGGTCATAAGACGGAAGCGTCAA
GAATTCGAACGTACCTCACGAGAGATAGAGGCGGAGGTGAGACGAGCTGAACAACGAGAG
AATGAAGAAGAGGGCTCTCAGCATCACGACACGCCGGAGAGACCGCGCAGATCACGTTCT
TCTGCTACGCCGCCGCCGCTGGACAGTGAGACGCCAGAGAAGAAACCGGAACGTCGCCCG
TCTAAGGATAAAAGAAGCAACCACAAGTCATCTGAGAAGACAGATAGAAAATTGGACGTC
ATTCAAGAAGAGAAGACACCAAAGAAAACGAACAAATACGAAACTACACCAACCATGACG
AAAGCTATCAAGTCGAGCTCAAATTCAAGTTCCAGTGACTCAGACGACGACTCGTCTAGT
ACCAGTAAATCATCGTCAGAGAGTGAACCGGAAGTGAAAGTAGAAAACAATAGGACTAAG
AAACGTAAGCGTAGAAGTACCAGCTCCAGCGACACTAACAAGAAATCAAAGAAACATAAG
AAAGACAAATCACACAAATCGAGCGAGAAGAGTTACTCCAAGAAACATCAGGAGGAATAC
GATAGGAATGATAAATCTAGATCCAAGAGAAAAGACGAATATTATGAAAAGCACAAACAT
AGAAGCCGGGACGAAAGGTCGCACAAAGACAAGTACAGGGAGGAGTCGGACGAGGACAGG
GCGAGGAAGCGGTCCAAGCGTTCAGTTAGCTACGAATCAAGATCGGGACGACGAAAAAGT
AGAGATCGATCCGAAGATAGATCTCGAAGGCGGGACAAACGATCCTACGATAGGGATAGG
TCTTACGATAGGTCCAGAGACTACGATAGGTATGATCGCCACGACAACTATTCCCGCCAT
CGCAGATGA
Protein sequence:
MFSSKDAVNPGYPTQWALNPTAYQNIDSSQVDWAALAQQWIAMKEAAVIVSTPQSKADVE
EGEAPMEVENPEASEPPIGAGPEWNGSTNSWGGSWNQWGWGWSGTGPMDPKMASDPSIAM
GPMMDSYPVADNNTTMPGYTSGAVPTPTFQHGYWTAQNSDQSGNNRNRDRRSKSKTREIK
PTRSRSHRDKLPLIPPVMEPLVMPTPTSTIDAAKRRQLPAWIREGLEKMEREKQKAIERE
QEKKAREEAEKEKKRIEEEELQRLRDEGHTVLPAKSKFDSDSEGEAPPPPPAVIPPPLGR
KSKEEALQDVMLAVRRSLTEILLEVTDSEIQTVSQEEVARYNAAQASRLNAMKASKSKAL
ASIASGLGLGAYESSEDSGDEDQHDMSDQQLQEVIRRKRQEFERTSREIEAEVRRAEQRE
NEEEGSQHHDTPERPRRSRSSATPPPLDSETPEKKPERRPSKDKRSNHKSSEKTDRKLDV
IQEEKTPKKTNKYETTPTMTKAIKSSSNSSSSDSDDDSSSTSKSSSESEPEVKVENNRTK
KRKRRSTSSSDTNKKSKKHKKDKSHKSSEKSYSKKHQEEYDRNDKSRSKRKDEYYEKHKH
RSRDERSHKDKYREESDEDRARKRSKRSVSYESRSGRRKSRDRSEDRSRRRDKRSYDRDR
SYDRSRDYDRYDRHDNYSRHRR