New model in OGS2.0 | DPOGS201062  |
---|---|
Genomic Position | scaffold3963:+ 11751-14491 |
See gene structure | |
CDS Length | 1173 |
Paired RNAseq reads   | 146 |
Single RNAseq reads   | 403 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005232 (2e-87) |
Best Drosophila hit   | ND |
Best Human hit | TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L (4e-07) |
Best NR hit (blastp)   | PREDICTED: similar to predicted protein [Tribolium castaneum] (1e-16) |
Best NR hit (blastx)   | PREDICTED: similar to predicted protein [Tribolium castaneum] (3e-12) |
GeneOntology terms    | GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0005515 protein binding GO:0030914 STAGA complex GO:0003713 transcription coactivator activity GO:0043966 histone H3 acetylation GO:0006352 transcription initiation GO:0006338 chromatin remodeling GO:0000118 histone deacetylase complex GO:0004402 histone acetyltransferase activity GO:0016986 transcription initiation factor activity GO:0005634 nucleus GO:0003677 DNA binding GO:0051090 regulation of transcription factor activity GO:0003702 RNA polymerase II transcription factor activity |
InterPro families    | IPR009072 Histone-fold IPR004823 TATA box binding protein associated factor (TAF) |
Orthology group | MCL24143 |
Nucleotide sequence:
ATGTCTAACATATCCACAAGTTCGAAAAATCATTCCAAGAAAACCAATAGTCGAGAACGT
GATAAAAATAAATCCATCGCTTCCGAATCTGGCGGTTCCAGTCAGTGTGATACGCCGCCA
CTTATTGAAAAGGATGCGACATCTCAAGGGAGGTTTGCAGGAGTCGGAGCAGATTCAGTG
CTGTGCATGGCCGAGCAGATTGGAGCCGAAATTAATACTGAGGCAGCTACGAACCTCGCT
GAGGACGTCAGCTATAAACTGCGGCAGGTTATCAGTACAATCGCCCTTCACAGCGAGTTG
ATGAAAAAGTCGTGTGTGGACAGTTGGGATGTTAACACTGTCTTTACATTATCAGACACA
AGTCCTGTGGTCGGCTCTTGTTTGCTACAGTATGTAGCTGTGGGTGAAGAAAAATTGTGC
TGTGAAGTAGAAAATCTTATAAATATATCAGAATACTCAATGGTGACGCAGAGTTATGTG
TTCTCAACACTGCCGACAGTCTCTGTTGAGTGGATAATAGATGAAAAGTGTTTAAACAAT
AGTAGCAGTATAAGTGCAAACTTACAAAACTATTATACAAAAATTGCTAGAGCGATATTA
AATCTGAAAAGGAAACCTAAAGAGATTGCCGTAGAAGATTTAGCTACAAATACCCGTATT
GGTCCCATATTTCCGAACCTCTTCAATCTGGCTGTGTTAGTTCTTAACGATGATAATTTA
AATGCCCTGAATGTACCAGCGAAGAAACCATTGCAATCCAATGTGTTGGATATGGTGGAT
GCTTTGTGTTCCAACCCATGCAGCTTGGACACCAACATACAACAACAGTTTCAAAGATTG
TTCCCTGTGATGGTGTCAAATATTTTGGGCAACGGTTCGCTAGCAGAGAAGATGGTTGCC
ATACTCACTAAAATCACAAGAACTTGGCCATCTTTTATAGCCATAGGTAAAGGCATTCTC
TTTGACTACTTATCTCAGGGTACTAAAGAGAGACTTACAGCTCCTATGATCCGATGCGTG
CTGGCGTTGGGCCGACACGCGCTGGTCGAGTGTCTGGGGGATCATCTGGAACATTTGGAC
GACTGCGTGCAGGCGCGTGTGGGCGGCCTCAGGGAGACTTATGACCACTCCCAACTTACT
ATGCAAACGAGGAGGGACCGGAAGGTGCCATGA
Protein sequence:
MSNISTSSKNHSKKTNSRERDKNKSIASESGGSSQCDTPPLIEKDATSQGRFAGVGADSV
LCMAEQIGAEINTEAATNLAEDVSYKLRQVISTIALHSELMKKSCVDSWDVNTVFTLSDT
SPVVGSCLLQYVAVGEEKLCCEVENLINISEYSMVTQSYVFSTLPTVSVEWIIDEKCLNN
SSSISANLQNYYTKIARAILNLKRKPKEIAVEDLATNTRIGPIFPNLFNLAVLVLNDDNL
NALNVPAKKPLQSNVLDMVDALCSNPCSLDTNIQQQFQRLFPVMVSNILGNGSLAEKMVA
ILTKITRTWPSFIAIGKGILFDYLSQGTKERLTAPMIRCVLALGRHALVECLGDHLEHLD
DCVQARVGGLRETYDHSQLTMQTRRDRKVP