| New model in OGS2.0 | DPOGS202485 |
|---|---|
| Genomic Position | scaffold1547:- 4-4850 |
| See gene structure | |
| CDS Length | 804 |
| Paired RNAseq reads | 23 |
| Single RNAseq reads | 73 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013788 (3e-54) |
| Best Drosophila hit | CG9518 (4e-38) |
| Best Human hit | choline dehydrogenase, mitochondrial precursor (7e-18) |
| Best NR hit (blastp) | PREDICTED: similar to alcohol dehydrogenase [Acyrthosiphon pisum] (1e-43) |
| Best NR hit (blastx) | PREDICTED: similar to CG9517-PB, isoform B [Apis mellifera] (3e-43) |
| GeneOntology terms | GO:0008812 choline dehydrogenase activity GO:0006066 alcohol metabolic process GO:0050660 FAD binding |
| InterPro families | IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal |
| Orthology group | ND |
Nucleotide sequence:
ATGACAACTTGGTTGCCAAGTGACGTATTTTCTATATGCGCGGAGTATCCAGCGCCGATA
TTATCATGTTCTCCGGCTGCATATATGTATTTGTCTCTAGTTATGCGATTGTTTGGTGGA
GTTAATTATAGCGTAAATTATCCCAGACGGAATCCATACTCGACTCTTCAATATACACAT
TCGTCGTCAATTGATAAAAATCCATTGCGCAATTCTCTGTCTGAATATTATCCCGGTCCA
TATCTGAACCCGGCGTATTCCCGATTAAATTACAATTCATATCCTCATGAAACACATTTT
GATCGCAGTTTTAATTACAATCCTTTTCAACCATGGGACTCGATTGGTGGAGAGTCGAAA
GTAGAAATAAAAAAAGAAAAGAACAAAGGAAAGGATGGAGGAAAGTCAAGAAGGAAAAGG
AATGCTAAGGAATATGATTTTATTATTGTCGGGGCTGGATCGGCGGGCTGTGTGTTGGCG
AATAGATTGTCAGAAGTCAAAAAATGGAGGGTGCTCTTGTTGGAAGCCGGTCCTGAAGAG
CCAGACGTAACGATGGTGCCTTCATTAGCGACGATTCTAAGACAATCTTCTATTGACTGG
CGGTATGAAACACAACCCGAACCCTTGACCTGTAGGTCTTATAGAAGCCGATCCTGTCCA
TGGACCAGAGGTAAAACAATGGGTGGTTCCAGTGCCATAAACTATTTAGTTTACATGAGA
GGTAACAGATATGATTATGATAACTGGGCTAATTTAGGAAACCCTGGCTGGAGTTATAAT
GAGGTGATTGTGGTTTTGTATTAA
Protein sequence:
MTTWLPSDVFSICAEYPAPILSCSPAAYMYLSLVMRLFGGVNYSVNYPRRNPYSTLQYTH
SSSIDKNPLRNSLSEYYPGPYLNPAYSRLNYNSYPHETHFDRSFNYNPFQPWDSIGGESK
VEIKKEKNKGKDGGKSRRKRNAKEYDFIIVGAGSAGCVLANRLSEVKKWRVLLLEAGPEE
PDVTMVPSLATILRQSSIDWRYETQPEPLTCRSYRSRSCPWTRGKTMGGSSAINYLVYMR
GNRYDYDNWANLGNPGWSYNEVIVVLY