| New model in OGS2.0 | DPOGS207482 |
|---|---|
| Genomic Position | scaffold2230:- 184-2446 |
| See gene structure | |
| CDS Length | 1068 |
| Paired RNAseq reads | 318 |
| Single RNAseq reads | 947 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | CG8290, isoform A (9e-42) |
| Best Human hit | transcriptional regulator ATRX isoform 2 (8e-19) |
| Best NR hit (blastp) | hypothetical protein AaeL_AAEL003126 [Aedes aegypti] (1e-48) |
| Best NR hit (blastx) | GE12393 [Drosophila yakuba] (2e-43) |
| GeneOntology terms | GO:0016251 general RNA polymerase II transcription factor activity GO:0005634 nucleus GO:0008270 zinc ion binding |
| InterPro families | IPR011011 Zinc finger, FYVE/PHD-type IPR013083 Zinc finger, RING/FYVE/PHD-type IPR017907 Zinc finger, RING-type, conserved site |
| Orthology group | MCL20306 |
Nucleotide sequence:
ATGAGCGATCTCGCCAACGATTCTATTGAAGTGTTGGAGAAGCCGGTAAAAGAAAATGAA
ATTAAGTTCCCGCCTTTCCCAGATCCGACGGATGAAGATTTTGATGAAGATATACAACAG
GATGAGAGAGATTATTACAAAAATAAATTTAAAGATTTAAACACAATAACGTCGATGAGA
TTGCATTGTTCTGCTTGTGATCGCCATTTAGGATGTTCCCCACGCAATGAGTCTCGTATG
AGACGCCATCCAATGCTAAGAACACTAGTCTGCCATACTTGTCATACCTTTTATAATAGC
GGAGAGTTTGAGAAGGGTGATGATGGATCTGAACTGTACTGTCGGTGGTGCGGACAAGGT
GGCCAGGTCTATTGTTGCTCAGCCTGCCCGCATGTCTTCTGTGCGAAATGTATCAAAAGA
AATTTGGGTGCTCCAAAGATAAAGGAAATTGAAGAATTAGATGACTGGAAATGTTTTAAG
TGTAATAATAAATGTCTTTGGGATTTAAGAGGTATTTGCTGGGCTGTGCTGAGATTTTGT
TGTTTAAAAAATAGAATTTTGCAACAAACCAAAGATCTTGCTATGAAAGAAGCATATTTG
AAAGATTGTTCTCAAGATAACTCTGAATGTTGTAAAAGTAAAGTTTCTAAGAAAAAGGAA
AAACAAGAATCTAAGAAGAAAGAAATAGAAACATCAGTCAAGAAACAAACAACCGCAATT
ATAAATAAAATACCACCAACAATACAGGTCAAAAAATTTGCATCGATAAATTTGGATGAA
TCAACAAAAGTAGAAGCAAAGAAAGCACAGAAACGACCGGCGAGCCCAAAGAACAAACCG
ATCATCATAAAAAATCCCTTGTCCATACCAACCAAAGTTGTCAACCAGATAAATGTATCA
CCGATGCCTAAAAAAATAAGGGGTCTGGACATTAATGCGGTTGCAGCCATAGCTAGCACC
TCCCAGGACAATGATGTCGTCTGCACGCCAGATTTTCCTTTAGAGCCATTGTGTGAGGTG
AGATACATTAATTATATATGTGACGAGACAAAACTTCTTATCATTTGA
Protein sequence:
MSDLANDSIEVLEKPVKENEIKFPPFPDPTDEDFDEDIQQDERDYYKNKFKDLNTITSMR
LHCSACDRHLGCSPRNESRMRRHPMLRTLVCHTCHTFYNSGEFEKGDDGSELYCRWCGQG
GQVYCCSACPHVFCAKCIKRNLGAPKIKEIEELDDWKCFKCNNKCLWDLRGICWAVLRFC
CLKNRILQQTKDLAMKEAYLKDCSQDNSECCKSKVSKKKEKQESKKKEIETSVKKQTTAI
INKIPPTIQVKKFASINLDESTKVEAKKAQKRPASPKNKPIIIKNPLSIPTKVVNQINVS
PMPKKIRGLDINAVAAIASTSQDNDVVCTPDFPLEPLCEVRYINYICDETKLLII