| New model in OGS2.0 | DPOGS209335 |
|---|---|
| Genomic Position | scaffold6155:- 4990-7939 |
| See gene structure | |
| CDS Length | 1221 |
| Paired RNAseq reads | 564 |
| Single RNAseq reads | 1342 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004251 (2e-44) |
| Best Drosophila hit | ornithine decarboxylase 2 (7e-48) |
| Best Human hit | ornithine decarboxylase (9e-44) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC015912 [Tribolium castaneum] (6e-72) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC015912 [Tribolium castaneum] (1e-67) |
| GeneOntology terms | GO:0004586 ornithine decarboxylase activity GO:0006596 polyamine biosynthetic process |
| InterPro families | IPR009006 Alanine racemase/group IV decarboxylase, C-terminal IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal IPR000183 Ornithine/DAP/Arg decarboxylase IPR002433 Ornithine decarboxylase |
| Orthology group | MCL25375 |
Nucleotide sequence:
ATGGTTATTGAAAAGAGGGTTTCGAAGGCATTAGTATTGGAAAACAATACTGCCGAGGAT
GTCTCCCGAGCTATGATAGAAGCGGTCAAATCAAATGATAGTGACTTTATGTTAAAGCTA
GCAGCCTCACTTGGCCTTGGCTTCGATTGTGCTTCACCGGGTGAAATACATAAAGTATTG
AAACTCAAAGTATCGCCACTGAGTATCGTTTTTGCAATGCCAACAAAAAGTCCAGAGTGG
ATGTTATATGCAAGACAATGCGGGATTAAACACACCACTTTTGACAATTTGTGCGAACTA
AATAAAATAAAACAATTCTGGCCCGATGCAAAATTGTTACTGCGGATAAGAGTTCATAGC
GACAGTGTTTACGATTTAGGGAAGAAGTTCGGTTGCGATTTTGAAACAGAAGCTATTGAT
TTACTAGAAGAAGCTGCTGCACTCAATATTACAGTGGTTGGGGTAGCATTCCACGTAGGA
AGTGGTTGTTCATCACCGGACAGCTATGTCTTAGGACTTCAACAAGTTAAACAACTGTTC
GAGCATGAGGATAAGGCGGGACGAAAAATGAAAATTGTTGATATCGGAGGCGGATTCTTG
AGTGATAAAACTGATAGGATTGACAAGGTATCCAAACTGGTAAACAATGCTATAGAAGAA
TTATTCCCGGACCCAGAGGTCCAAGTGATCGCTGAGCCCGGACGGTATCTGTGCGATAAC
TCATTTACTTTATATTGCAATATTAACACAGTGCGACCGGTACAAGTTGGTGACTCTTCT
ATTAATATGCTGTATTTAAATGACGGAGTGTTTGGTTGTTTGAGGTACAATGAACCATGG
CACACCGTCAAACGGTTTCGGGTACACTCTGAGGGCGAACAATTAAAACCTACTGTATTA
TGGGGTCCAACCTGTCATCCAATTGATCGCGTACTTGACAACCTTGTTATAATGTTGCCA
GCTTGTACGATTTACGATTGGCTCGTGTTTCCGAGTAGAGGGGCTTATAGCATGACTATG
GCGTCTAGGTTTTCCACTTTACCAGAACCGCATATACGAAATGTTATATCACAAGAATTG
TTTAACATCCTAAAGGATTCTAAAGTTTTGGGTCTTGATGACTTCCTGGAACAGAACATC
GCCACGCCACTTCCACCCACTTTGCCGTCAATAATTGTTCACTCCAAAATATTGCAAACG
AATTACACTTTGGCGGTTTGA
Protein sequence:
MVIEKRVSKALVLENNTAEDVSRAMIEAVKSNDSDFMLKLAASLGLGFDCASPGEIHKVL
KLKVSPLSIVFAMPTKSPEWMLYARQCGIKHTTFDNLCELNKIKQFWPDAKLLLRIRVHS
DSVYDLGKKFGCDFETEAIDLLEEAAALNITVVGVAFHVGSGCSSPDSYVLGLQQVKQLF
EHEDKAGRKMKIVDIGGGFLSDKTDRIDKVSKLVNNAIEELFPDPEVQVIAEPGRYLCDN
SFTLYCNINTVRPVQVGDSSINMLYLNDGVFGCLRYNEPWHTVKRFRVHSEGEQLKPTVL
WGPTCHPIDRVLDNLVIMLPACTIYDWLVFPSRGAYSMTMASRFSTLPEPHIRNVISQEL
FNILKDSKVLGLDDFLEQNIATPLPPTLPSIIVHSKILQTNYTLAV