| New model in OGS2.0 | DPOGS205693 |
|---|---|
| Genomic Position | scaffold156:- 52020-52757 |
| See gene structure | |
| CDS Length | 738 |
| Paired RNAseq reads | 1000 |
| Single RNAseq reads | 2949 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009830 (7e-129) |
| Best Drosophila hit | eIF6 (5e-109) |
| Best Human hit | eukaryotic translation initiation factor 6 isoform a (1e-109) |
| Best NR hit (blastp) | p27BBP/eIF6-like [Spodoptera frugiperda] (4e-135) |
| Best NR hit (blastx) | p27BBP/eIF6-like [Spodoptera frugiperda] (1e-128) |
| GeneOntology terms | GO:0003743 translation initiation factor activity GO:0005515 protein binding GO:0005638 lamin filament GO:0005882 intermediate filament GO:0042256 mature ribosome assembly GO:0043022 ribosome binding |
| InterPro families | IPR002769 Translation initiation factor IF6 |
| Orthology group | MCL13452 |
Nucleotide sequence:
ATGGCGTTACGTGTCCAATTCGAAAACAATAACGAAGTGGGAGTTTTCAGTAAACTTACA
AATTCATATTGCCTTGTCGCAATCGGCGGGTCTGAGAATTTTTACAGCGTGTTTGAAGCT
GAATTGGCGGACACAATTCCAGTAGTACACATTAGTATTGCCGGTTGCAGAATTATCGGT
CGTATGACAGTAGCGAACAAGAACGGATTGCTGGTTCCAGCATCAACTACAGACACAGAA
TTACAACATATACGCAACAGCTTGCCGGACAACGTTAAAGTACAAAGAGTCGAGGAACGT
CTGAGTGCTCTCGGTAATGTTATTGCTTGCAATGATTATGTCGCACTAGTTCACCCAGAC
CTTGACAAAGACACGGAGGAAATTCTCGCTGACACACTGGATGTGGAAGTTTTTAGGCAA
ACAGTAGCTGGCAATGTTTTGGTAGGATCATATACCGCTCTCAGCAACAGGGGTGGGTTG
GTGCACCCCAAGACAACTATACAGGATCAAGATGAGTTATCTTCCTTATTACAAGTACCT
CTGGTTGCCGGAACAGTGAATCGTGGCAGTGACGTAGTCGCAGCCGGCCTAGTGGTCAAC
GACTGGTGTGCCTTCTGTGGCATGGACACCACTTCAACTGAGATATCAGTGATTGAAAGT
GTGTTCAAACTGAACGATGCTAAACCAACAGCCATCACTTCTACCATGCGAGCCTCTCTC
ATTGACAGTATGTCATAA
Protein sequence:
MALRVQFENNNEVGVFSKLTNSYCLVAIGGSENFYSVFEAELADTIPVVHISIAGCRIIG
RMTVANKNGLLVPASTTDTELQHIRNSLPDNVKVQRVEERLSALGNVIACNDYVALVHPD
LDKDTEEILADTLDVEVFRQTVAGNVLVGSYTALSNRGGLVHPKTTIQDQDELSSLLQVP
LVAGTVNRGSDVVAAGLVVNDWCAFCGMDTTSTEISVIESVFKLNDAKPTAITSTMRASL
IDSMS