| New model in OGS2.0 | DPOGS205707 |
|---|---|
| Genomic Position | scaffold156:+ 18954-26816 |
| See gene structure | |
| CDS Length | 2721 |
| Paired RNAseq reads | 4601 |
| Single RNAseq reads | 11270 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009917 (3e-38) |
| Best Drosophila hit | HDAC4, isoform D (9e-127) |
| Best Human hit | histone deacetylase 4 (2e-111) |
| Best NR hit (blastp) | histone deacetylase 7A, putative [Pediculus humanus corporis] (0.0) |
| Best NR hit (blastx) | histone deacetylase [Aedes aegypti] (2e-135) |
| GeneOntology terms | GO:0004407 histone deacetylase activity GO:0016568 chromatin modification GO:0000118 histone deacetylase complex GO:0005737 cytoplasm GO:0005634 nucleus GO:0045449 regulation of transcription |
| InterPro families | IPR000286 Histone deacetylase superfamily |
| Orthology group | MCL10520 |
Nucleotide sequence:
ATGGCCCACGAGAGTGCGAGCGGTGCGGAAGGATCCCCGCAGCACACGCCGTCGCCGCCG
CACGCCTCCCGCCTGCCCGACGCCATCCACCACCAGATCATGCAGACTCAGAGGCCGAGA
ACGAACCATATAGCGGAGAGAGCGAAACAAACATTAGAAAATAATTTCCTGCTGCAACTG
AAAAAGCAGCAGCAGCTGCAGCAAGAAATCTTGTTGCAGCACTTCCAGCAGCAGCGGCAA
CAGCTTGCCGAACAGCACGAGCAACAGATCAGACATCACCTAAAGTTGTGGGAGCAGCAG
AAGGCGATGGAGGAGGCGGCGCTGAGGGAGGCCAGGGAGGCGAGGGAGGCGCGGGAGGCC
AGGGAGAGACACGAGCGGGACCGCGTCGAGCTCATGAGGAAAAAGGACAAGCACGAGCAC
AGCGCCAACGCCTCCACACAGGTCAAGCAGAAGTTACAGGAGTTCCTAAAGAAAAAACAA
GCAGCCGCTAGCGCCAACGGCACCGTGCCCGGGTCGCCTTACAGGAACTGGGGTATAGTG
AAGTCTTCGTCCGGCGAGTCGATCACTTCGACCAGTGCGGTGGCCGGCGTGCACCCCTAC
CGTCTGACGGCGGCGCCTCTTCCCCTAGCCCCCAACGCCGCAGCCCCGCAACCTTCGCCA
GCCGACTTCCCGCTCCGGAAGACAGCCTCGGAGCCCAACATGCTGAAGGTGAGGCTGAAG
GCGCGCGTCATCGAGCGGCGGGCCTCCCCGCTCGCCAGGCGACCTCTCAAGACCCGCATC
AAGCATCGCAATTGCGAGGGCGGCTCCCCCCGCGGCTCCCCGCCCGGCTCGCTAGCGGCG
CCCATCCGCGAGGAGGAGGAGGGCCGCGCCAACGAGCTTCTCTTTTCGTCGCCCTCTCTA
CCCAACATCTCGCTAGGGCGACCGCACGCCGCTCCTCGTCACGTGCCGCCCGCACACGCC
CCCCACGTCGGCCAGGTGCCCCCCGCCGTCCTACCGCCCGTGTCCGAGGCGGAGGCCTAC
AGCGGTGCGGCCGCCCTCGGCGCTCGTCTCGCCAAGCGACCGCTCGGGCGGACACACTCG
GCGCCCCTGCCGCTGGGTGACCCCGCGTTGACTCCTCACACCCACCCTCACCCGCCTTCC
GCGCATCACTACCTGAGAGACCAGATCCGTAAGACGGTGCTGACGCGGGCACACGATGCG
GCCGCGGCTCAGTTGCGGGAGGAGGAGGGCGAGGTCATAGACCTGACGTCTCGACGCCCG
CCCTCCCCGAGCGCTCCGCCCGCCCCCGGCCCAGCTCTCGGCGCCGCTCCGCTAGCCCGC
GCGCTCAGCTCCCCGCTAGTGGGCGCTCGCCCTCCCGCCACCGGCCTCGCATACGACGCG
CTCATGCTTAAACATGGATGCGCCTGCGGCGCCCATGCGCCCACGCACCCCGAGCACGGC
GGCCGGCTGCAGTCGGTGTGGGCACGACTGTGCGAGACGGGTTTGGCGGCGCGAACTGAG
AGGACGCGCGCCCGCAAGGCCACGCTCGAAGAGCTACAGTCGGTGCACGGGGAGGCGCAC
GTCGCGGCGTGGGCAGGACGAGGTCGCCCGGGCGCCGGGGACGGGCGGGCGGTGCGGCTC
GTCAGGCTCGCCTGTGGCGGTCTGGGGGTAGATGCCGACACCGCCTTCAGCGACGCTCAC
ACGCCGCCCGCCGCGAGACTCGCCGCCGGAGCGCTCATAGACCTCGCCACACGGACCGCC
ACCAACGAGCTCAGGAACGGTTTCGCGATAGTTCGTCCTCCGGGTCACCACGCCGAGCCC
AACCAGGCGATGGGCTTCTGCTTTTTCAACAACGTGGCAATCGCCGCCCGCATCTTGCAC
ACGCGGCTCGGCCTCCAAAGGATACTCATAGTGGACTGGGACGTCCATCACGGTAACGGC
ACGCAGCAGATCTTCTACGAGGACCCTCACGTGCTGTATATCTCCCTCCACCGACACGAC
GACGGCAACTTCTTCCCGGGCACGGGTGCGGCCAGCGAGTGCGGCGCCGGGCCCGGGCTG
GGGTACACCGTGAACGTGGCCTGGCCCGGGTCACCGCCCCTGGCCGATGCGGAGTACTTG
GCCGCCTTCCGCACCGTCGTGATGCCCATCGCCAAGGAGTACGACCCCGAACTGGTGCTC
GTGTCGTGCGGCTTCGATGCGGCCGCCGGCCACCCGGCGCCCATGGGCGGCTACAACGTC
TCGGCGGCCTGCTTCGCTCACATGACGCGCGAGCTCATGTCGTTGGCAGGCGGCAAGGTC
GTGCTGTCACTGGAGGGCGGCTACGACCTGGCCGCCATGTGCGACTGTGCACAGGAGTGC
GTGCGGGCGCTGTTGGGCGAACGCCTCGCCGCGCCCTCACTGTCCGAGTTGGCCCGAGCC
CCCGCGCCCCACGCTCAGGCTGCTCTTCGGACGGCTCTCGCGGCGCAATCTCCACACTGG
CCCGTGTTGAAGCGGTACAGTTCATTGATCGGCGTGTCGGCCCTGGAGGCGGGCCCGAGC
GCGCTGGCTCGGCGTGGTCGAGCGCACGCTCAGCGGGACGACGACACCGCGGCTGCCATG
GCGACGCTGTCCATGCAGCACGCGCACCGCTCGCTGGCGCCGCCGCCGCCGCCGCAGACC
CAGCCGCTGGCCCTCGACCGGTCGGCGGACAGCTCCCGCTCGGTGTCGGAGGAGCCCATG
GAGCAGGACGAGGTGAAGTGA
Protein sequence:
MAHESASGAEGSPQHTPSPPHASRLPDAIHHQIMQTQRPRTNHIAERAKQTLENNFLLQL
KKQQQLQQEILLQHFQQQRQQLAEQHEQQIRHHLKLWEQQKAMEEAALREAREAREAREA
RERHERDRVELMRKKDKHEHSANASTQVKQKLQEFLKKKQAAASANGTVPGSPYRNWGIV
KSSSGESITSTSAVAGVHPYRLTAAPLPLAPNAAAPQPSPADFPLRKTASEPNMLKVRLK
ARVIERRASPLARRPLKTRIKHRNCEGGSPRGSPPGSLAAPIREEEEGRANELLFSSPSL
PNISLGRPHAAPRHVPPAHAPHVGQVPPAVLPPVSEAEAYSGAAALGARLAKRPLGRTHS
APLPLGDPALTPHTHPHPPSAHHYLRDQIRKTVLTRAHDAAAAQLREEEGEVIDLTSRRP
PSPSAPPAPGPALGAAPLARALSSPLVGARPPATGLAYDALMLKHGCACGAHAPTHPEHG
GRLQSVWARLCETGLAARTERTRARKATLEELQSVHGEAHVAAWAGRGRPGAGDGRAVRL
VRLACGGLGVDADTAFSDAHTPPAARLAAGALIDLATRTATNELRNGFAIVRPPGHHAEP
NQAMGFCFFNNVAIAARILHTRLGLQRILIVDWDVHHGNGTQQIFYEDPHVLYISLHRHD
DGNFFPGTGAASECGAGPGLGYTVNVAWPGSPPLADAEYLAAFRTVVMPIAKEYDPELVL
VSCGFDAAAGHPAPMGGYNVSAACFAHMTRELMSLAGGKVVLSLEGGYDLAAMCDCAQEC
VRALLGERLAAPSLSELARAPAPHAQAALRTALAAQSPHWPVLKRYSSLIGVSALEAGPS
ALARRGRAHAQRDDDTAAAMATLSMQHAHRSLAPPPPPQTQPLALDRSADSSRSVSEEPM
EQDEVK