| New model in OGS2.0 | DPOGS205710 |
|---|---|
| Genomic Position | scaffold156:+ 53480-56661 |
| See gene structure | |
| CDS Length | 960 |
| Paired RNAseq reads | 154 |
| Single RNAseq reads | 799 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009921 (8e-15) |
| Best Drosophila hit | CG4080 (5e-08) |
| Best Human hit | E3 ubiquitin-protein ligase MARCH2 isoform 2 (9e-12) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC010659 [Tribolium castaneum] (1e-17) |
| Best NR hit (blastx) | PREDICTED: hypothetical protein [Monodelphis domestica] (1e-13) |
| GeneOntology terms | GO:0008270 zinc ion binding GO:0005765 lysosomal membrane GO:0006897 endocytosis GO:0005768 endosome GO:0046872 metal ion binding GO:0016874 ligase activity GO:0005783 endoplasmic reticulum GO:0010008 endosome membrane GO:0016021 integral to membrane GO:0016020 membrane GO:0005789 endoplasmic reticulum membrane |
| InterPro families | IPR018957 Zinc finger, C3HC4 RING-type IPR011016 Zinc finger, RING-CH-type IPR013083 Zinc finger, RING/FYVE/PHD-type |
| Orthology group | MCL21886 |
Nucleotide sequence:
ATGTCAGCTTCTAGCTGCTCGTCCCTTCATATGTCTAATAACGGCAACACACAAAGGGAA
AGAGATCTGCGATCAACAGCTCAGCAAACAGAAATAAGTTGTCGTTATTCACCCGGCATT
GGTTCACCAGTAAATATAACGGATAGTGAAGAACAACGTCAACTGCGAGCCTGCATCGCT
GACTCTCTTACCTTCTCCTCGCCAGCCTCGTCTTTACTGCAACCAAACAGACGCTCTGTC
TCTATACTTGGTTCCGTTTGTGCTCTATTGCTCAATAAACAGGGATCGGGACCCAAGGAG
TTGAGCGAGTCAGGCAGTCGTTCGGACAATATTTGTCGCATCTGCTTCGGTGGAGCGTCG
GGTGAAAGGCTGGTGAAGCCGTGCTCGTGCCGCGGGACCATCGCCGCCGTGCACCGCTCG
TGTCTGGAGCGCTGGCTGCTGCAGGCCGCCACCTCCTACTGCGAGCTGTGTCGACACCAC
TACGTCGTCACGAGGAGCCACAAATGGTCGTGGGCGCGGTCGGTGATGGAGTGGGCGCGC
TCGGGACGCGGCGCCGCCCTGGCCGCGGACGCGTGGCGCGGAGCGGCGCTGGGTGCAGCC
TCGGCCGGGGCACGCCGCGGAGGCGCCGCCGCCCTCGCCGCCAACCTCTTCTCCTCACTG
CTTATCGGTATCATTGGCGCTCTCAACGGTCTGTTGACGACGTGGATGCTACTAAAGATC
CAGGAGCACCAGATGTCGTGGCGAGCGTGGCGGGACAGCACTCTGCACGTACATGTGGCG
CTGGAGGACGCCACGTCGGAAGACACGGCCTCCCAGGAGACCGTTGTGGCAGATGGCGGC
AGACTGAGGTCGGACAGGGGACAGAGGCTGGGAGAAGAGAGAGACCTCACTGCGGACATG
GCGACCAACATAACAGACCCCTTCATGGTGGCTCTGCCCTTCACGTTACCGGATCCCTGA
Protein sequence:
MSASSCSSLHMSNNGNTQRERDLRSTAQQTEISCRYSPGIGSPVNITDSEEQRQLRACIA
DSLTFSSPASSLLQPNRRSVSILGSVCALLLNKQGSGPKELSESGSRSDNICRICFGGAS
GERLVKPCSCRGTIAAVHRSCLERWLLQAATSYCELCRHHYVVTRSHKWSWARSVMEWAR
SGRGAALAADAWRGAALGAASAGARRGGAAALAANLFSSLLIGIIGALNGLLTTWMLLKI
QEHQMSWRAWRDSTLHVHVALEDATSEDTASQETVVADGGRLRSDRGQRLGEERDLTADM
ATNITDPFMVALPFTLPDP