| New model in OGS2.0 | DPOGS207539 |
|---|---|
| Genomic Position | scaffold355:+ 14465-23995 |
| See gene structure | |
| CDS Length | 786 |
| Paired RNAseq reads | 14 |
| Single RNAseq reads | 55 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000211 (1e-24) |
| Best Drosophila hit | homeobrain (1e-30) |
| Best Human hit | homeobox protein ARX (5e-26) |
| Best NR hit (blastp) | homeobrain [Tribolium castaneum] (4e-39) |
| Best NR hit (blastx) | homeobrain [Tribolium castaneum] (2e-34) |
| GeneOntology terms | GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005634 nucleus GO:0006355 regulation of transcription, DNA-dependent GO:0043565 sequence-specific DNA binding |
| InterPro families | IPR009057 Homeodomain-like IPR001356 Homeobox IPR012287 Homeodomain-related IPR017970 Homeobox, conserved site |
| Orthology group | MCL16922 |
Nucleotide sequence:
ATGTCCAGCTCGCGCCGCACAGCCTACACCATAGACAGCATCCTCGGACGACAGACGACC
GAAGGCGTCGAGTTGAAAAGCGAAGGCGTGCACTCTGACTCGGATCACGAACACGAACAG
GAACACGAACATGAACACGAACACGAGCATGAGCACGAACACGAGCACGAACACGAGCCG
AACGTCGAGCCGGGGCGAGCAGACCACGAGCCGCTAGAAGCACTTGACGCCGGGAGACCA
CGCAAGGTGCGCCGCAGTCGGACCACCTTCACCACCTACCAGCTTCACGAGCTGGAGAGA
GCCTTCGACAAGACGCAGTACCCGGACGTGTTCACTAGAGAGGAGCTCGCACTACGTCTG
GACCTCAGCGAGGCGAGGGTTCAGGTGTGGTTCCAGAACAGACGCGCCAAGTGGCGCAAA
AGAGAGAAGGCACTGGGGAGAGAACACGCGCCTTTCCTGCATCACGAACATGGTGTGGGG
GAGTGGGGCGGCGGTATGGGCGTGGGTGGTGTGGGCGTGGGTGTCGGTGTAGGCGGCGGG
GAATGGTGGCTCGGTCTGGGCGCTCCACTGTGGCACGACGCGCCTCCCGCCGCAGCCTTC
AGAGCTTTACTTCACAGGTACGTGCTGGCGCTGCCTCCGCCGGCCGCGATCTCCCCCCCT
GCTCGGTCTCCCCCTCCATCCCCAGCTCGTAGCTCTCCTCCCCGGCCGGTAGCCCCAATG
GCGCCCGCGCCGCTCTCGGAGCCACTACGCCTACTACACGACCGCTACAGCCGCGTACAC
ACGTAG
Protein sequence:
MSSSRRTAYTIDSILGRQTTEGVELKSEGVHSDSDHEHEQEHEHEHEHEHEHEHEHEHEP
NVEPGRADHEPLEALDAGRPRKVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELALRL
DLSEARVQVWFQNRRAKWRKREKALGREHAPFLHHEHGVGEWGGGMGVGGVGVGVGVGGG
EWWLGLGAPLWHDAPPAAAFRALLHRYVLALPPPAAISPPARSPPPSPARSSPPRPVAPM
APAPLSEPLRLLHDRYSRVHT