| New model in OGS2.0 | DPOGS202728 |
|---|---|
| Genomic Position | scaffold485:- 162374-165235 |
| See gene structure | |
| CDS Length | 1098 |
| Paired RNAseq reads | 684 |
| Single RNAseq reads | 2103 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005452 (2e-159) |
| Best Drosophila hit | CG6724 (1e-97) |
| Best Human hit | ribosome biogenesis protein WDR12 (3e-44) |
| Best NR hit (blastp) | PREDICTED: similar to CG6724-PA, partial [Apis mellifera] (1e-120) |
| Best NR hit (blastx) | PREDICTED: similar to CG6724-PA, partial [Apis mellifera] (4e-122) |
| GeneOntology terms | GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0070545 PeBoW complex |
| InterPro families | IPR011046 WD40 repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR019775 WD40 repeat, conserved site IPR019781 WD40 repeat, subgroup IPR012972 NLE IPR001680 WD40 repeat IPR020472 G-protein beta WD-40 repeat IPR015943 WD40/YVTN repeat-like-containing domain |
| Orthology group | MCL14491 |
Nucleotide sequence:
ATGGCTGATTTAGGGGATAGTCAATTACTCGTGCGATTTGTAACCAAACAGGAACAATAT
GCTGTTCCGGATAGTCCTATAGCTATACAAAGCAATGTTTTGTCATCGGATCTTAATACT
CTTCTTAAAGCACTTTTAAAGGAAACTAATCCATCTTTAGAAAAAGTAGCTGATTTCGAT
TTTTTAATATGTGGAGAACTGTTATGTACTTCAATTGCGGAGCATATACAGGAGAAAGGT
ATTTCCACAGAAGACACATTAGAAGTTGAATATTTAGAGCGTTTTCCCGCACCTAGACCT
CAAGATTGTTTGATGCACGATGATTGGGTGTCAGCAGTACACACTCAAGGCAACTGGATA
TTATCAGGGTGTTATGACAACAGCATTCACATTTGGAGCACAAAAGGGCAACATAAACTT
TCCATACCTGGCCACACATCTCCTGTTAAAGCAGTATCATGGGTTTCTGTAACCAATGAG
CAAGCAATCTTTGTGAGGTACATAGGAAAATATATAAGTCTTTCTGATGAACATAATGCA
CCTGCCAAAAAGAAAAGTCGTCCAGAACAAGGAAAAATAAGAGAACCATTAACAACTTTG
AAAGGCCATAGAGAGGCTGTTTCCGGTATAAAGTGGATGGATTTTAACACAGTCGTGTCT
AGTGGTTGGGATCATTTGATTAAGATATGGGATTGTGAACTTGGAGGATTGAAACAGGAA
ATTGCCGGTAATAAGGCCTTCTTTGATTTGGACTGGTCACCGTTAAACAATAACATCATA
ACAGCCTCAGCAGACAGACACATTCGACTTTATGATCCAAGATCAACAGATAGCATAGTT
CGAACAACTTATACATCACATAATGGTTGGGTGCAATCTGTACGTTGGTCGACTACTAAG
GACACATTGTTCCTCTCTGCTGGTTATGATGGCCAGGTGAAGTTATGGGAGACGAGAAGT
CCAAAAACTCCATTATATGATCTGAGCGGTCATGAGGATAAAGTACTCTGCTGCGACTGG
TCCAACCCAGCATTACTTATCAGTGGCTCCTGTGATAACACACTGAGGATATTCAAATCC
AAACATGCCCTTCAATAA
Protein sequence:
MADLGDSQLLVRFVTKQEQYAVPDSPIAIQSNVLSSDLNTLLKALLKETNPSLEKVADFD
FLICGELLCTSIAEHIQEKGISTEDTLEVEYLERFPAPRPQDCLMHDDWVSAVHTQGNWI
LSGCYDNSIHIWSTKGQHKLSIPGHTSPVKAVSWVSVTNEQAIFVRYIGKYISLSDEHNA
PAKKKSRPEQGKIREPLTTLKGHREAVSGIKWMDFNTVVSSGWDHLIKIWDCELGGLKQE
IAGNKAFFDLDWSPLNNNIITASADRHIRLYDPRSTDSIVRTTYTSHNGWVQSVRWSTTK
DTLFLSAGYDGQVKLWETRSPKTPLYDLSGHEDKVLCCDWSNPALLISGSCDNTLRIFKS
KHALQ