New model in OGS2.0 | DPOGS202738  |
---|---|
Genomic Position | scaffold485:+ 143934-157320 |
See gene structure | |
CDS Length | 1326 |
Paired RNAseq reads   | 430 |
Single RNAseq reads   | 1517 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005357 (2e-105) |
Best Drosophila hit   | alan shepard, isoform E (4e-80) |
Best Human hit | RNA-binding motif, single-stranded-interacting protein 3 isoform 2 (1e-59) |
Best NR hit (blastp)   | PREDICTED: similar to CG32423-PB, isoform B [Apis mellifera] (7e-90) |
Best NR hit (blastx)   | GI11982 [Drosophila mojavensis] (8e-82) |
GeneOntology terms    | GO:0003674 molecular_function GO:0005575 cellular_component GO:0009629 response to gravity |
InterPro families    | IPR000504 RNA recognition motif domain IPR002343 Paraneoplastic encephalomyelitis antigen IPR012677 Nucleotide-binding, alpha-beta plait |
Orthology group | MCL11030 |
Nucleotide sequence:
ATGGCTAGCGCGGGCGCGCAGTACCGCGGCGGCGCGCAGCAGTGGGCCGCTGCATACGCG
CCGCAGCCCTGCCGCTACCCGCCGCCACAGCAGCACTACGCAGCGGCACCCAGCCCTTTC
ACTCCCCATCAGTACACGAGTGCAACGATGGGGGGAGGATGCGGCGCCACGGGTACGAGG
GTACCGACGGCTGCATCGCCGGCTAACACGGCGTCCAGCTCGTCGTCCAACTCCGCGGGG
GGTACTCGATCTACCAGCCTAAGTACCGCCCCGCCTCCGCCCGCCTCCTCAGCCTCAACT
ACAGGCGCGTCCGGCGAACAACTCAGCCGCACCAATCTCTACATACGCGGCCTGAGCCAG
ACCACAACCGATAAAGACCTCGTCCAAATGTGCCAGATGTATGGCAACATAATATCAACA
AAAGCAATATTGGATAAAAATACAAATAAATGTAAAGGTTACGGTTTTGTAGATTTTGAA
ACAATCGCGTCAGCTGAGGCCGCTGTAAAAGGATTACAAGCCAAAGGTGTTCAGGCCCAA
ATGGCTAAAGTGGGTATCTGGTTCCTGCGTAGACTGAACCGTCAACAGGAACAGGATCCA
ACCAACCTGTATATGGCCAACTTGCCACCGCACTTTAAAGAGAACGATGTTGACCAACTG
TTGGCCAAGTTTGGTCAAGTCGTGTCCACGAGGATCCTGCGTGATACCCATGGACACAGC
AAAGGCGTAGGCTTCGCAAGAATGGAGTCTAGAGAAAAATGCGAGCAGATTATCCAAATG
TTCAATGGAAATCCGATACCGGGCGCTAAGGAGCCTTTGCTTGTGAAGTTTGCCGATGGG
GGTAATAAGAAAAAGGCTCTGTATAATAAGCAGAATGACAACAACGGTAGAGTGTGGCGA
GACAACAATGATTCCATCACTCAGGCGATGAGTGTGACGGGTGTGTACGCTAGCGGTGTC
GGCGGCGCCGGCGGGGAGTGCGGCGTGTACCGCAGTAATGTATACGGCGTGGCGTTCCAT
CCTCAGCTCCACGCTCCAGCCTGGCTGCCGTACGCGGCACTGCTGCCGCCCGCCCATCAC
GCGCCCCACGCCCCGCACCCCGCACACCCCGCACACCCACAGCATCTGCCCATCGATACC
GTGCCTAGTCAATATGTGAACTGGGACAGCTTAAGGCCGGAAAATGAATTATACTACTTC
GCGTCGCACCCTTACCAGTATTTCACTGGTCCAACACCGCCCATCATTCAGATGCCGATG
GAGAGCGAGCATGCGTCGACGGCCGCCTCCCCGGACGAGGCCTACCAGCCTTACCCCCCC
AAGTAG
Protein sequence:
MASAGAQYRGGAQQWAAAYAPQPCRYPPPQQHYAAAPSPFTPHQYTSATMGGGCGATGTR
VPTAASPANTASSSSSNSAGGTRSTSLSTAPPPPASSASTTGASGEQLSRTNLYIRGLSQ
TTTDKDLVQMCQMYGNIISTKAILDKNTNKCKGYGFVDFETIASAEAAVKGLQAKGVQAQ
MAKVGIWFLRRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFGQVVSTRILRDTHGHS
KGVGFARMESREKCEQIIQMFNGNPIPGAKEPLLVKFADGGNKKKALYNKQNDNNGRVWR
DNNDSITQAMSVTGVYASGVGGAGGECGVYRSNVYGVAFHPQLHAPAWLPYAALLPPAHH
APHAPHPAHPAHPQHLPIDTVPSQYVNWDSLRPENELYYFASHPYQYFTGPTPPIIQMPM
ESEHASTAASPDEAYQPYPPK