| New model in OGS2.0 | DPOGS211438 |
|---|---|
| Genomic Position | scaffold1246:- 103100-105312 |
| See gene structure | |
| CDS Length | 732 |
| Paired RNAseq reads | 914 |
| Single RNAseq reads | 2751 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002187 (2e-45) |
| Best Drosophila hit | nanos (3e-11) |
| Best Human hit | nanos homolog 1 (9e-13) |
| Best NR hit (blastp) | nanos-O [Bombyx mori] (6e-49) |
| Best NR hit (blastx) | nanos-O [Bombyx mori] (3e-54) |
| GeneOntology terms | GO:0003723 RNA binding GO:0005737 cytoplasm GO:0008270 zinc ion binding |
| InterPro families | IPR008705 Zinc finger, Nanos |
| Orthology group | MCL17177 |
Nucleotide sequence:
ATGGTTTTGGGCCACAAGTTCACACCGTGGGGCAGTCAGGACATGTGGCCGGAGTTCAGG
TCGAGTCTGGAGGGGGAGAAGCGCCCGAGCAGGAGACGCACCAGCAGCTACACTGACGAG
CCTCGTTCGCTGGACGACATCATGCAAGAGTTCAGGATGAACGGGTTCGACTCCCCGTAC
GAGCCGGACCAGGCTGCCGACGCACACTCCGTGCATCACCCGCCACGCCCCGAGGCGCCG
AGCGCCCACCAGCTGCAGGTGTTGAGTTCTCTCCCCAACGCCGTGTTGTACTCCTTACTG
AGGGAGTTGGAACAGACTCGTTTGGCTGAAAAAAAACAAGAGGAAATGGAGTGTCGTTTC
TGTAAGAACAACGGCGAGCGAGCGTCCTACTACCGCTCACACCGCCTAAGGTCCCGCGGC
AGGGTCTCCTGTCCCGTACTGCGGGCCTACACCTGCAGGAGGTGCGGCGCCCGCGGAGAC
CACGCGCACACCATCAAGTACTGTCCGCTAGCCACCAACGACGAGCGTTTAAAATCAGCC
GCCATGATGCGCAGCGTGCGCATGGCGTCCGGTCGTCGGCGTGGGTTCGTGTCAGCGCCA
TCTAGCGACGCGCGGACGGAGTACGTCGTGTTCGGAGAGACTACACCGAGCGCGCTCACA
GATGGCGCTGATTACAATAACTATGAACTGGATCCTCTCTGGGAGGCGCTGGAGAGAAAA
CTGATGTTTTAA
Protein sequence:
MVLGHKFTPWGSQDMWPEFRSSLEGEKRPSRRRTSSYTDEPRSLDDIMQEFRMNGFDSPY
EPDQAADAHSVHHPPRPEAPSAHQLQVLSSLPNAVLYSLLRELEQTRLAEKKQEEMECRF
CKNNGERASYYRSHRLRSRGRVSCPVLRAYTCRRCGARGDHAHTIKYCPLATNDERLKSA
AMMRSVRMASGRRRGFVSAPSSDARTEYVVFGETTPSALTDGADYNNYELDPLWEALERK
LMF