New model in OGS2.0 | DPOGS211463  |
---|---|
Genomic Position | scaffold1246:+ 88694-90285 |
See gene structure | |
CDS Length | 1491 |
Paired RNAseq reads   | 12 |
Single RNAseq reads   | 32 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002168 (4e-177) |
Best Drosophila hit   | CG11966 (1e-67) |
Best Human hit | zinc finger protein 552 (5e-12) |
Best NR hit (blastp)   | PREDICTED: similar to AGAP002993-PA [Tribolium castaneum] (6e-101) |
Best NR hit (blastx)   | hypothetical protein AaeL_AAEL000826 [Aedes aegypti] (8e-100) |
GeneOntology terms    | GO:0003676 nucleic acid binding GO:0005622 intracellular GO:0008270 zinc ion binding |
InterPro families    | IPR007087 Zinc finger, C2H2-type IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
Orthology group | MCL16442 |
Nucleotide sequence:
ATGCCTAGTGAAGCGAAGCGACGCGCGCCGGCAAAACAACGCGGCAGGGTGGCGGCTTCC
AAGTATGGCGGTGGGGTGTCTCTCTCGGGTGTTGCGGTGAGGCGCGGCATGAAGTGCGCC
GGTGTGGCCGGCGGCGGCGACGAGCTGCTGCTGGGCGGCTGCTGGCTGGACCCCAAGGAC
GCCTCCCCTCCGCCCTGCCACGAGCTCCTCGACTCTCTCCTCGCCCCTCCACCACTGGCC
GAACTCAAACCTCTCCCGCCCTTCACCGGATATACCGGCCACCTCTCCATCAACGGCATC
TCCGGTCATCATTTCCATGCTATAGCACAACGTCTTCCAGAAGAAAACAACAACTATCCC
ACGCAGAGCGGTTACGGTGCCGATCAGGATGTGGTCTCCTCGTCTACGTGTGCCGCTGAA
TCCGAGCCTCCGGATCTCGAGGATGTCAAACCTTTCCCTCTGGACGCCCCGGATACCAAA
CCGTTTGCAGAGTCGTCGGCACCCGGTGTAGCGGACTCCTGTGCTCAATCTTGTTCCCCG
CCTGCGAAAATATTTGATGATGGACATAAACAAGACATGTACGACATCAGTTCAATAGAG
GACTTAGCAGCCATCATTGGCTCCGCGATCGCTGATACGACTGTTCAGTCTCAGCCGGAG
GATCCTGACAGAAATGATTCTAGAGATAGCTGGATGGACATAGATGCATGGATAGCGGGC
GCTTGTAGTCAACATGGTGACAAAATAGTTCAACAAGACCTATCGGAATTCGGTTTCGGT
TCTCCGCCACCATCACAATCGAGTCACCAGTCCAGTATAGACTTTCCATGCAAGCCCAGC
CAAGAGTTCTCGAAGAGAGAAGAATTTCTTCAAAAGAATTTAGGACAGGCTGGATCTACT
CTCCAGTCGCTATTATCTCATGGCTACATGCCTTTATTGCAAAACAGATTGCAAAATGGT
CCCCCTGTTAAACAAGAGGCTCCAAGTTCGACGAGTTGTGGCATGGACGTAATATCAACG
TCGTCGCCACCAGGGAACGCCGTTTCAACCACAGACGGTGTTGGAGGATTGCTCAATGGC
AGATATGCACCCCATTATGCTCTCGGGCTAAAACTGGATGGACTCTGTAGTCCAGAAAGA
TTACTCGGCTATTCACACGCCCACACGACTACGGTTACTCCATCCAGTAAAAGTAAACGT
AGTCGAGCAAAAGCAAAACAAGTAAACAACGGAGGAAGTCTGCATGGAAGTTCGTTAGCC
TTCGCATCGGCAACATCTGCGGAACTGAGCGGCTTGCTAGGGAAAGAGAAACCGGTGCAT
CGCTGTGGGATCTGTAATAGAGGGTTCTTGAACAAGTCCAACATAAAGGTTCATCTCCGG
ACTCACACCGGGGAGAAGCCCTTCAGATGCGACGTATGCGCAAAGGCTTTCCGTCAGAAG
GCGCATCTGATAAAACATCAGCAGATCCACAAGAGGATTGGGCGGGACTAG
Protein sequence:
MPSEAKRRAPAKQRGRVAASKYGGGVSLSGVAVRRGMKCAGVAGGGDELLLGGCWLDPKD
ASPPPCHELLDSLLAPPPLAELKPLPPFTGYTGHLSINGISGHHFHAIAQRLPEENNNYP
TQSGYGADQDVVSSSTCAAESEPPDLEDVKPFPLDAPDTKPFAESSAPGVADSCAQSCSP
PAKIFDDGHKQDMYDISSIEDLAAIIGSAIADTTVQSQPEDPDRNDSRDSWMDIDAWIAG
ACSQHGDKIVQQDLSEFGFGSPPPSQSSHQSSIDFPCKPSQEFSKREEFLQKNLGQAGST
LQSLLSHGYMPLLQNRLQNGPPVKQEAPSSTSCGMDVISTSSPPGNAVSTTDGVGGLLNG
RYAPHYALGLKLDGLCSPERLLGYSHAHTTTVTPSSKSKRSRAKAKQVNNGGSLHGSSLA
FASATSAELSGLLGKEKPVHRCGICNRGFLNKSNIKVHLRTHTGEKPFRCDVCAKAFRQK
AHLIKHQQIHKRIGRD