| New model in OGS2.0 | DPOGS204693 |
|---|---|
| Genomic Position | scaffold1451:+ 4660-7159 |
| See gene structure | |
| CDS Length | 2121 |
| Paired RNAseq reads | 395 |
| Single RNAseq reads | 916 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | Ku80 (5e-12) |
| Best Human hit | X-ray repair cross-complementing protein 5 (5e-35) |
| Best NR hit (blastp) | ku P80 DNA helicase [Culex quinquefasciatus] (2e-77) |
| Best NR hit (blastx) | ku P80 DNA helicase [Aedes aegypti] (4e-68) |
| GeneOntology terms | GO:0005634 nucleus GO:0003677 DNA binding GO:0005737 cytoplasm GO:0004003 ATP-dependent DNA helicase activity GO:0008283 cell proliferation GO:0043066 negative regulation of apoptosis GO:0070419 nonhomologous end joining complex GO:0008022 protein C-terminus binding GO:0010843 promoter binding GO:0060218 hemopoietic stem cell differentiation GO:0051575 5'-deoxyribose-5-phosphate lyase activity GO:0000784 nuclear chromosome, telomeric region GO:0043564 Ku70:Ku80 complex GO:0050769 positive regulation of neurogenesis GO:0006303 double-strand break repair via nonhomologous end joining GO:0003691 double-stranded telomeric DNA binding |
| InterPro families | IPR016194 Spen Paralogue and Orthologue SPOC, C-terminal-like IPR014893 Ku, C-terminal IPR006164 DNA helicase, ATP-dependent, Ku type IPR005161 Ku70/Ku80, N-terminal alpha/beta IPR005160 Ku70/Ku80 C-terminal arm |
| Orthology group | MCL15370 |
Nucleotide sequence:
ATGGCGCCAACGAAAGTAGATCAAGGTACTATCATAATTTTAGACGTTGGAAAAAACGTT
TCAATATTAGAAGACAAAAATCAGAAAAGTTTTTTTGAAAGTGCAAGAGAATGCGCCGTT
CGTATTATAGAGAGAAAAATTTTAAGTCAAGGTAAAAACTTGCTGGGCATAATATTACTC
GGATCCAAAATAAGCAAAAATAATCTGTCCGAACAAACGCCGGGTTGTTGTCGGAATATT
GAACTTTTAGCGGAACTGCAGTACCCCACCTGGAAAATGATACGAGACTTACCTACACAA
CCGACAAAATCGACTGGCAATTGGTTGGATGCGCTTATAGTAGCTGTAGACCATTTCAAA
AGTCATACATCAAGTTTTAAAATTGCTGATAAAAATATAATTCTGTTGACCAACTTTGAA
GCACTATCTGACTTAGAAGAAAGTGATATTGAAACGGCCATTTCGGGCTTTCAAGAAGAT
GGCTTTGAATTGGATGTGATCGGTCCAGAATTATACAATGAAGACAACAAAAACTCTGAT
ATAGATCTAGCAAGACAATTTGTTGAAGGAACGAATGGCAGCACAGCCACTTTTGACTAT
GCCATGAGATATTTACTATTCCACAAAAAGAAAACCGTTAATTCTAATCCATGGAATGTC
GATTTAAGTATTGGACCGAACATTAAAATACCAGTTTCCGCATACATCAGAATTAAAGAT
GAACCAGTTGTCAAAAATTTTAACAAGTCTGTTAGAAATCCCGTCACAGAAAAATCAAGT
GCTACTGAATATATTGAGAGAAAGAAGACATTCATTAACACAGAAGCTCAAATGGAAGTG
GAGTCTACCGAGGTTATTAAGGGTTATCAGTACGGGGAACAGGTGATACCATTTTCAGAT
TTTGATAAAAGTATGATTTATGATGCTGGAAACAAATCACTCAATGTATATGGCTTTACA
AAATCGGGTAATATTACTTGGCAGAACTTGAATGGAGATGGACTATATTATGTTTTTGGA
CAAAAAGGAGATAAAAAGAGTGAATATGCCGTCAGATGTCTCGTAGAATGCCTTTTGGAG
TTGGATTTAGTGGCTATTGTTAGAAGAGTGTATAATAATGGCAATGCTCCAAGAATGTTT
GTATTAATGCCGGTCATTGATTCAGAAAATTTTGTTGGTCTTTCAATGGCTGGTTTATGT
TACAAAGAAGAAATTAAGAGCATGGCTTTTCCGGCCACTAACCTCAAGAAATATAATTGT
TCTGAACAACAGGTTGAAGCATTTAAGGAGCTTATTAAAGCTATGGATCTCACCAAAGCA
TATGATGAATCAGATTTTGATGATACGGAAGCATTCCCTATAGCAAAGGTTGTTAGTCCA
TCGGCACAATATATTCTTGACTGTATAGCTTTCAGAGCAATGAATCCTCACCAGCCCTTG
CCACAGCCCAGAGATGACATCATGGTGCTGTTTAAAGTGCCTCCTCTTATAGAAAAAAGG
GCTAGAGATCCTATGGAAAAGTTAAAAGAGCTTTTTGAATTAAATAGAGTTGAAGTTAAA
AAGCCGAAAAGAAAGACAGTTCCTATGGATATTGATGAAAAACCAGGCACTTCTAGAGAA
CCAGAAATTTCTGATGATATGCCGAAAGTAAACCTTAATGTTGTTAAAAGACCTGATATT
ATAATTGGAACATTAAATCCTATAAATGATTATGAAAAGCTTAAGAATGAGGGTCGGACG
ATATGTGATCTGTACAAACAAATGATAGAAGCTATTGAGAGTCTAATACACGGCAACATC
GATGGTGACTTTACCAAAGCATTGGATGCAATGGCCTATCTCAGATCAGAATCATGTAAG
TCGGATCCGTCATATTATAATAATTGGATAAAGAATTTCAAACTCGATCTAATAGATCGG
AAGCAGAATAAAGTTTTGCATTTGATAAGTGAGGAAAATTTGAGCTACATACTTAAAAGT
GAGAACAACTTGAGTAATTTCGCCTCCAATGTGAGCGATGAAAGTCAGATGTATGAGAAT
GACACAGTTCCAACATTAACTCAAGTCAACATAAGTTCGGAAGTCGACAACATGTTTGAT
AATATGTTTGATGATATGTGA
Protein sequence:
MAPTKVDQGTIIILDVGKNVSILEDKNQKSFFESARECAVRIIERKILSQGKNLLGIILL
GSKISKNNLSEQTPGCCRNIELLAELQYPTWKMIRDLPTQPTKSTGNWLDALIVAVDHFK
SHTSSFKIADKNIILLTNFEALSDLEESDIETAISGFQEDGFELDVIGPELYNEDNKNSD
IDLARQFVEGTNGSTATFDYAMRYLLFHKKKTVNSNPWNVDLSIGPNIKIPVSAYIRIKD
EPVVKNFNKSVRNPVTEKSSATEYIERKKTFINTEAQMEVESTEVIKGYQYGEQVIPFSD
FDKSMIYDAGNKSLNVYGFTKSGNITWQNLNGDGLYYVFGQKGDKKSEYAVRCLVECLLE
LDLVAIVRRVYNNGNAPRMFVLMPVIDSENFVGLSMAGLCYKEEIKSMAFPATNLKKYNC
SEQQVEAFKELIKAMDLTKAYDESDFDDTEAFPIAKVVSPSAQYILDCIAFRAMNPHQPL
PQPRDDIMVLFKVPPLIEKRARDPMEKLKELFELNRVEVKKPKRKTVPMDIDEKPGTSRE
PEISDDMPKVNLNVVKRPDIIIGTLNPINDYEKLKNEGRTICDLYKQMIEAIESLIHGNI
DGDFTKALDAMAYLRSESCKSDPSYYNNWIKNFKLDLIDRKQNKVLHLISEENLSYILKS
ENNLSNFASNVSDESQMYENDTVPTLTQVNISSEVDNMFDNMFDDM