New model in OGS2.0 | DPOGS204694  |
---|---|
Genomic Position | scaffold1451:+ 11249-20688 |
See gene structure | |
CDS Length | 1797 |
Paired RNAseq reads   | 3429 |
Single RNAseq reads   | 8372 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007473 (3e-151) |
Best Drosophila hit   | CG7082, isoform D (2e-73) |
Best Human hit | tudor and KH domain-containing protein isoform a (2e-42) |
Best NR hit (blastp)   | hypothetical protein AaeL_AAEL013072 [Aedes aegypti] (2e-84) |
Best NR hit (blastx)   | PREDICTED: similar to tudor and KH domain-containing protein [Tribolium castaneum] (7e-82) |
GeneOntology terms   | GO:0003723 RNA binding |
InterPro families    | IPR004088 K Homology, type 1 IPR018351 Tudor subgroup IPR008191 Maternal tudor protein IPR018111 K Homology, type 1, subgroup IPR004087 K Homology IPR002999 Tudor domain |
Orthology group | MCL13956 |
Nucleotide sequence:
ATGGCTCTTAACACCAAATTGTTATTGCCCGCTCTATTGGGCTTCTCATTGGTGACAGTT
AGTGCATTTGTTGTGTACTATGTGTTCAAACGAGAAGATGAAGCGGAAGATAAACCAATT
CGATCAACTAAGCTTAATATGATTGAAGTTAAAGTACCTAAAAGTATTGTCCCAGCTCTC
ATCGGTAGGGGCGGGACAAATATTAAACAAATCGAGGAGAAGACGGGTGCAACGATACAC
TTTAAAAAGTTCAGCGATAAGCAATACGATGTTTGCATTCTACGCGGAAGATCTCACTCT
ACGCAGGTAGCTGAGACATTGATACATGACTTCATCAAACAACAGCCGTTGATAGAAAAC
GACACTATGGAGGTACCCGGCTGGGCTTGCGGCAGGATTATCGGTGGCAGCGGTGATACG
ATAAACCTGATAAGCCACACTAGTGGGGCTCGGGTTAAGGTTGAGGGGGAGAGAGGAGAC
AACGGTCAGCGGCACGTCAGTCTGAAGGGCACCGCGGAACAGATCGAAGCGGCCAAGAAA
ATGATCGCTGAATGTGTGGAATCGGAGAGATGTCGTCGCGAGATAGAACAGTCTAGACGT
TTACCGCGCGTGCCGACCCCGCCAACCGGGCAGCCAGCCCAGCCGGTGGCGGTGCAGGCA
GAGCTGCCGGCAGCTCAGCCCAACAGACCGGACACGCCAGGTGACACCGCCAAGCATGTG
AAATACAGGCGTGAGGCGTCTTCGTCAATAGAGGTGTACGTGTCAGCGGTGTCGTCTCCG
TCACGTTTCTGGGTTCAGTTCGTCGGGCCTCAGGTCTCCCAGCTGGATGAACTGGTTTCA
CACATGACGGAATATTACAATAAGAAAGACAACAGAGCGAACCACGCGTTAAGTCACGTG
AGCGTGGGCCAGGTCGTGGCGGCTGTGTTCAGACACGACGGTCGCTGGTACAGGGCGCGG
GTCAACGACATCAGGCCGAACGAATTTGATCACACCCAGCAAGTGGCGGATGTGTTTTTC
CTGGACTACGGCGACAGTGAATACGTGGCTACCCACGAGCTCTGCGAGCTGAGGGCCGAT
CTGCTAAGACTGAGGTTCCAGGCGATGGAGTGTTTCCTGGCCGGCGTGGAGCCCGCGAGG
CAGAGGAACGAGGCCGGCGCGGCTCGCTGGCATCCCAACGCTATTGAAAGATTCGAGGAA
CTGACACAGGTGGCCAAGTGGAAGCCTTTGATGTCCCGCACGTGTAGCTACAGACGTAGC
GCTGTGGTCGGCGGCCGGGAGAGAGAAGTTCCCGGGATAAAGTTATATGACGTCACGGAC
GGGAATTACTTGGACGTGTGTGAGGTGCTCATAGCTGAGGGCTGGGCGGTGCCGGCGGCC
TGCGACACGTTCCGCGGGGCCTTGGGCGGCGGGGGAACACCGGGGGGGCCGTACGGAGAC
TTGGGACACTCACGCGTTCTGGGTATGGTGACCGGAAATCGAGCGTCATCAATGCCGGCT
GAGGCCAAGGACAAGCCGAGGACACCGGGACCGGAAACGTTCAGAGACAACCCGATGTCA
AAGTCACTGGCTTCCGGTTTGGAAAATTCAGATAAAATCAAATCCGTATCTAACTTCGAT
CTCTCCTACTCCGAGACTGTTCCGAAGTCGAACGGCACGAGCGACTTCCTCGACTCCGAG
ATAACGGCCAACGAGAAACAACTCGAAGTCAAATCGAAGTCACTCAACGACGAGAAAGCG
AAGATGAATAGGATCGACTCGCATCATAGTAATTTAGAATCTCTCGGAAGGATTTGA
Protein sequence:
MALNTKLLLPALLGFSLVTVSAFVVYYVFKREDEAEDKPIRSTKLNMIEVKVPKSIVPAL
IGRGGTNIKQIEEKTGATIHFKKFSDKQYDVCILRGRSHSTQVAETLIHDFIKQQPLIEN
DTMEVPGWACGRIIGGSGDTINLISHTSGARVKVEGERGDNGQRHVSLKGTAEQIEAAKK
MIAECVESERCRREIEQSRRLPRVPTPPTGQPAQPVAVQAELPAAQPNRPDTPGDTAKHV
KYRREASSSIEVYVSAVSSPSRFWVQFVGPQVSQLDELVSHMTEYYNKKDNRANHALSHV
SVGQVVAAVFRHDGRWYRARVNDIRPNEFDHTQQVADVFFLDYGDSEYVATHELCELRAD
LLRLRFQAMECFLAGVEPARQRNEAGAARWHPNAIERFEELTQVAKWKPLMSRTCSYRRS
AVVGGREREVPGIKLYDVTDGNYLDVCEVLIAEGWAVPAACDTFRGALGGGGTPGGPYGD
LGHSRVLGMVTGNRASSMPAEAKDKPRTPGPETFRDNPMSKSLASGLENSDKIKSVSNFD
LSYSETVPKSNGTSDFLDSEITANEKQLEVKSKSLNDEKAKMNRIDSHHSNLESLGRI