New model in OGS2.0 | DPOGS212239  |
---|---|
Genomic Position | scaffold1401:- 4514-5998 |
See gene structure | |
CDS Length | 1485 |
Paired RNAseq reads   | 27 |
Single RNAseq reads   | 67 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002632 (6e-20) |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | endonuclease-reverse transcriptase [Bombyx mori] (6e-122) |
Best NR hit (blastx)   | endonuclease-reverse transcriptase [Bombyx mori] (4e-125) |
GeneOntology terms    | GO:0005634 nucleus GO:0005737 cytoplasm |
InterPro families   | IPR005135 Endonuclease/exonuclease/phosphatase |
Orthology group | MCL20827 |
Nucleotide sequence:
ATGCGTCGCATGGGTACAAAGATCGAAGAATACGATAACTGTATACTCTGCTACACAGGA
CGGACTCAAGGGCAATACGGTGTCGGATTTCTAATCAATATAGAACACAAGAGTAACATA
GATAGCTTCATGGGTATATCCGAAAGAGTCGCACTACTGAACATAAGTATACAGGACAAA
AAGTTGTCCATAATACAATCGTATGCCCCAACAGAGGCAACAAAAGATGAAGAACTAGAA
AACTTCTATGCAGACTTGTACAAAGCCATCAACCTAGCTTATAGAACATACATAATCATG
GGCGACTTCAATGCCAAAATAGGTCAACCAAAGGCAGATGAATACTTGATAACAAAACCA
AACGGCTACGGTACAAGAAACAACAGAGGACAAAGGCTTATAGATTTTGCACTCGAAAAT
AAAACAGCAATTTTAAATACCTACTTTTCAAAGAAACCGAAGCGAAGATGGACGTGGCGT
TCACCAAGTGGGGACTACAAAAACGAAATAGACTACATTCTGTCTAACAAACCCAATATG
GTACAAAATATAGAAGTGCTAAATCTTAATTTTCCTTCTGACCATAGACCCGTCAGAGCA
ACAATAAAATCGCTAAAAACGAAAAAGAACCGGTCTGGCTACTCACAACACAACTATAAC
TCCAGCCTGAAGAATGATGATGAAGAAACCCTATACCACGAGTACCTCTCAGCAAGCCTA
CCAAATCCACTTGACCCTCACGATAATGTTCCAGTGCAATCCTATTACAATAACATAGTA
AATGCAATCACCCAAAGCCTCCAGAACGCAAAAATACCACCTAGTAAAAAACCACATAAA
AGACATAAGATATTATCAGATAACACGGTAGCGCTCATGGAGAGAAGAAAGCTACTACTA
AACACTAAAAACAAAAACAGGTCTATGAAAAACGAACTCTCAGCGCTATACAAATTAGTA
AGCAAACGTATAAAGCAAGATTATGCAAGATACAGAGCGGATACCGTCGAGAAACACTTA
ATTCAATCAGGCAGTTCAAAAAGAGCGTTTAAAGAGCTAAGAACAAACAGGAAATGGATC
GACGGTCTAAAAAGTGAAGGAAAAACCGCAAACAGTCGCCACGAAATCAAAGAAATTGCA
ACAAAATTCTACAGATCACTTTATAGCACGCAAGATCAGAAAAGCTACGAGGAAAATCCC
GATCTAAGTAACACATTCAGAGCTGCAAATTCAAATGAATGCATACCATTCACTACAACA
GAAGTAACCCAAGCAATAAATAGACTAAAAGCAAATAAAAGTCCCGGCTCCGACAACATT
ACAAATGAAGCATTAAAATCGGCAGTATTACTACTGGCTCAACCGCTGACTGTCCTTTTT
AACCGAATATTGAAATCCTCAACAACACCAACACAATGGTCCGAGTCAGAATACTCATCT
ATAAAAAAGGAGACCCATGCGAGGTTGGGAACTATAGGCCAATAA
Protein sequence:
MRRMGTKIEEYDNCILCYTGRTQGQYGVGFLINIEHKSNIDSFMGISERVALLNISIQDK
KLSIIQSYAPTEATKDEELENFYADLYKAINLAYRTYIIMGDFNAKIGQPKADEYLITKP
NGYGTRNNRGQRLIDFALENKTAILNTYFSKKPKRRWTWRSPSGDYKNEIDYILSNKPNM
VQNIEVLNLNFPSDHRPVRATIKSLKTKKNRSGYSQHNYNSSLKNDDEETLYHEYLSASL
PNPLDPHDNVPVQSYYNNIVNAITQSLQNAKIPPSKKPHKRHKILSDNTVALMERRKLLL
NTKNKNRSMKNELSALYKLVSKRIKQDYARYRADTVEKHLIQSGSSKRAFKELRTNRKWI
DGLKSEGKTANSRHEIKEIATKFYRSLYSTQDQKSYEENPDLSNTFRAANSNECIPFTTT
EVTQAINRLKANKSPGSDNITNEALKSAVLLLAQPLTVLFNRILKSSTTPTQWSESEYSS
IKKETHARLGTIGQ