| Genomic Position | scaffold1401:- 3267-4367 |
|---|---|
| See gene structure | |
| CDS Length | 1101 |
| Paired RNAseq reads | 10 |
| Single RNAseq reads | 38 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011163 (5e-23) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase [Bombyx mori] (9e-138) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase [Bombyx mori] (1e-129) |
| GeneOntology terms | GO:0006278 RNA-dependent DNA replication GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10020 |
Nucleotide sequence:
ATGGAAAAATACAAAGAAAAACAAAGAGCACTGTACATCGTCTTCATCGACTATAAAAAA
GCTTTCGACTCAGTTTCACATTCAAGTATATGGAAGGCGCTAGCCGAACAAGGCGTACAA
GACGGGTACATTCAAATATTAAGAAATATTTACAAAAACAATAGAGGTAGAGTCAAATTG
GAAAGTGCAGGCCCATGCTTCCCCATAGAGAGAGGGGTGAGACAAGGCGACCCAGCCTCC
CCGACTCTGTTTATTGCCATTCTAGAGTCCATAATAAGAAAGCTAGACTGGAAAACTAAA
GGCATCAACATAGACGGAAACTATCTGAACCACCTACGATTCGCTGACGATTTGGTACTC
TTATCAGAATCTAGCGTACAATTACAGGCTATGATTCATTCCTTAAATGTGGCAAGCAAA
AAGGTGGGCTTAGAGATGAACCTCACAAAAACAATGTTGATGACAAACGGTTCAGAAAAG
ACAATATCAGTCGACAAGGAAACATTGAAATATACAAATAAATATATATATCTAGGCAAA
CAAGTCAGCTTTGATAGTAGTAGCAACCATCTAGAAATCGAGAGGAGAATCCAACTTACC
TGGAACAAATATTGGAGTCTGCGTGAAATTTTTAAAAGCAGTATGCCAGTAAGTATAAAG
ACAAAAGTAATGTCTAGCTGCTTGTTACCTTGCCTAACTTACGCTTGCCAGACCTGGAAG
CACACGACCAAAGTAAAGAAGAAAATTGTCGCTTGTCAAAGAGGTTTAGAACGAAGCATG
CTAAAAATCAAAAGAATCCAAAAAATACGTCACACCAAAATAAGGAGCATAACTAATGCC
ACAGATGCGCTGAACTATTCACAGAAACTGAAATGGAAGTGGGCAGGGCATGTAGCGAGA
ATGACTGACGAAAGATGGACAAAAACGGTAACTTTATGGCGAGGTCCGTGGGGGAAACGT
CAAAGGGGAAGACCGCTCACGAGATGGGATGACGATATCCGCAAAATTGCTGGTCAGAGT
TGGATACAAACAGCCCAAAACAGAGACATTTGGGCTTCTTTGGAGGAGGCCTACACCCGT
GGAGGGGTTCTTGTAGATTAG
Protein sequence:
MEKYKEKQRALYIVFIDYKKAFDSVSHSSIWKALAEQGVQDGYIQILRNIYKNNRGRVKL
ESAGPCFPIERGVRQGDPASPTLFIAILESIIRKLDWKTKGINIDGNYLNHLRFADDLVL
LSESSVQLQAMIHSLNVASKKVGLEMNLTKTMLMTNGSEKTISVDKETLKYTNKYIYLGK
QVSFDSSSNHLEIERRIQLTWNKYWSLREIFKSSMPVSIKTKVMSSCLLPCLTYACQTWK
HTTKVKKKIVACQRGLERSMLKIKRIQKIRHTKIRSITNATDALNYSQKLKWKWAGHVAR
MTDERWTKTVTLWRGPWGKRQRGRPLTRWDDDIRKIAGQSWIQTAQNRDIWASLEEAYTR
GGVLVD