DPGLEAN06349 in OGS1.0

New model in OGS2.0DPOGS202879 
Genomic Positionscaffold273:- 221277-224956
See gene structure
CDS Length1104
Paired RNAseq reads  869
Single RNAseq reads  2054
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA004202 (8e-130)
Best Drosophila hit  Nup44A, isoform A (3e-95)
Best Human hitnucleoporin SEH1 isoform 2 (1e-105)
Best NR hit (blastp)  sec13-like protein [Bombyx mori] (6e-180)
Best NR hit (blastx)  sec13-like protein [Bombyx mori] (3e-166)
GeneOntology terms










  
GO:0003674 molecular_function
GO:0051301 cell division
GO:0005643 nuclear pore
GO:0007049 cell cycle
GO:0015031 protein transport
GO:0055085 transmembrane transport
GO:0006810 transport
GO:0007059 chromosome segregation
GO:0051028 mRNA transport
GO:0005634 nucleus
GO:0000776 kinetochore
GO:0007067 mitosis
InterPro families





  
IPR011046 WD40 repeat-like-containing domain
IPR019782 WD40 repeat 2
IPR017986 WD40-repeat-containing domain
IPR019775 WD40 repeat, conserved site
IPR019781 WD40 repeat, subgroup
IPR001680 WD40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain
Orthology groupMCL13482

Nucleotide sequence:

ATGAGTGAATTAGGTGGGTGTAATTTATTTGAATCACAAGCAATAGTTGCCGATCACAAA
GACTTAATACATGATGTGGCTTACGACTTCTATGGGGAGAGAATGGCGACATGCTCTAGC
GACCAGTATGTAAAGGTGTGGGATTCTGATGGGCAAGGTGGTTGGAAACTGACTGCAAGC
TGGAAAGCACATCACGGCTCAGTGTGGAAAGTCACATGGGCACATCCTGAGTTTGGACAA
GTTCTGGCTACTTGTTCCTTTGATAGGACAGCTGCTATATGGGAAGAAGTTGGTGACACA
GCAGCATCGGGTACAGAGAAAGGGCTCAGGACTTGGGTGAAGAGATCAAATCTAGTGGAT
TCCAGGACTTCGGTCACAGATGTGAAGTTTGGGCCCAAGCATCTAGGGTTACTATTGGTG
ACATGTTCTGCTGATGGTATTATAAGGATATATGAAGCTCCCGATGTAATGAATTTAGCA
CAATGGACCTTGCAACATGAAATACCAACTAAGGTCTCTATCAGTTGTCTGTCGTGGAAC
CCATCATTATCAAGAAGTAGCAGTAACCCACCGATGTTGGCGGTGGGCAGCGACGAGCCC
AGTGTTGCTGATAAAGCCAGTTCAGAACGAGTCTTCATATATGAGTACAGTGAATCCTCA
AGGCGTTGGACCAGGACGGAGTGTTTGTCGTCTGTGGTGGAACCGGTCAATGACCTCGCC
TTCGCGCCGAACCTCGGCCGCTCCTTCCACCTGCTCGCTGTGGCCACTAAAGACGTGAGG
ATCATCAAAATTGAACCGTTGCCTGAGTCTTCCGGTTCCGCTAACGGCAGCGTCCGCTTC
AAGTCGGAAGTGTTGGCCGCCTTCGAGGAGCATTCGTCTTGTGTGTGGCGCGTCGCCTGG
AACGTTACCGGGACCATGCTGGCGTCTTCCGGGGACGACTGCTGTATCAGGCTATGGAAG
ATGCAATACATGAACCAGTGGAAAGGTGTCGGTGTGTTCAAGAGTGAGGCGACTGGGGGA
GAAGCGACCGCGCCGGCGCGTGCTCACACCACCTATACAAGACTGGCGCCCATGGCCAAC
CCAGCACACATGCCCTACCACTGA

Protein sequence:

MSELGGCNLFESQAIVADHKDLIHDVAYDFYGERMATCSSDQYVKVWDSDGQGGWKLTAS
WKAHHGSVWKVTWAHPEFGQVLATCSFDRTAAIWEEVGDTAASGTEKGLRTWVKRSNLVD
SRTSVTDVKFGPKHLGLLLVTCSADGIIRIYEAPDVMNLAQWTLQHEIPTKVSISCLSWN
PSLSRSSSNPPMLAVGSDEPSVADKASSERVFIYEYSESSRRWTRTECLSSVVEPVNDLA
FAPNLGRSFHLLAVATKDVRIIKIEPLPESSGSANGSVRFKSEVLAAFEEHSSCVWRVAW
NVTGTMLASSGDDCCIRLWKMQYMNQWKGVGVFKSEATGGEATAPARAHTTYTRLAPMAN
PAHMPYH