| New model in OGS2.0 | DPOGS202882 |
|---|---|
| Genomic Position | scaffold273:- 189975-194222 |
| See gene structure | |
| CDS Length | 1020 |
| Paired RNAseq reads | 1249 |
| Single RNAseq reads | 5385 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004158 (8e-101) |
| Best Drosophila hit | vismay, isoform B (7e-46) |
| Best Human hit | homeobox protein TGIF2 (3e-31) |
| Best NR hit (blastp) | achintya [Bombyx mori] (2e-133) |
| Best NR hit (blastx) | achintya [Bombyx mori] (3e-110) |
| GeneOntology terms | GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005634 nucleus GO:0003714 transcription corepressor activity GO:0042826 histone deacetylase binding GO:0007283 spermatogenesis GO:0045941 positive regulation of transcription GO:0016563 transcription activator activity GO:0043565 sequence-specific DNA binding GO:0006355 regulation of transcription, DNA-dependent |
| InterPro families | IPR009057 Homeodomain-like IPR001356 Homeobox IPR012287 Homeodomain-related |
| Orthology group | MCL15011 |
Nucleotide sequence:
ATGTTACCACCTACGGCCGGTATAGCACAAGATCAACGTGACCGGACCGACATGGCGTAT
CAACAACGACGCGACGTACGAGAAATTACAAGAGACATTATCAGAGAGGCTCGTGTAACA
AACAGAAAACAATCTATGTCGCCTGGAGCACGTGATCGTTTCCCTTCCACGTCGTCAACG
GACGACAATGAGTCGGGTACGGATGGAGAGCTCGAGAGACGGAGGGTCTCACATGGTGCA
CACATCGTACAGCCACCTGGTGGCATCATAGTCCGGAAGCGAAGAGGGAACCTTCCGAAA
CATTCAGTGAAGATATTAAAGCGTTGGCTGTATGAACACCGCTACAATGCTTATCCCAGC
GATGCTGAGAAACTAACCCTCAGTCAGGAAGCTAACCTCACAGTGCTACAGGTATGCAAC
TGGTTCATAAACGCCCGTCGTCGCATCCTCCCGGAGATGATCCGTCGCGAGGGTCACGAC
CCCTTGCACTACACCATCTCCCGCCGAGGAAGGAAGCAGTTGGGTGCAGGGTCTAGCTCA
CAGGCCGCCGCGTGGGACGGGGAGGGCGAACACGAGGGAGAGGGCGAGGGCGATGGAGAC
CGCGGCCGCGATCACGACTACGGCGACGGTCTGCTGGTGTACCGCAGCGACGGAGACGAG
GCGGCGGACGCCGAGGAGGGCTACTCCTCCAGCGCCATCTCCGAGGAGGAGGTCAAGTAC
GACCCCTCCGTGTGGCAGTCCGTCATACGGTACGGGCCCGAGGATAGGGACCTGCATCCC
GCGGCCAGAGGATCAGCGGCGGTGGTGACAGTGCGGACAGCGGAGGACGGGGAGGCGGAG
GTGTCCCCGGGGGGCGGCGCCGGGGGTTGGCACCCTCAGCTGGCTCATCTGCCGCAGCTG
CCTCACCCGCTGCGCCGCAAGACTGACGAACGTGACAAGTTTAAATGCCTGTACCTCCTC
GTGGAGACGGCCGTGGCGGTTCGTCAGAGGGAACAGGAACAGGAGGAGGTCCCCGTCTAG
Protein sequence:
MLPPTAGIAQDQRDRTDMAYQQRRDVREITRDIIREARVTNRKQSMSPGARDRFPSTSST
DDNESGTDGELERRRVSHGAHIVQPPGGIIVRKRRGNLPKHSVKILKRWLYEHRYNAYPS
DAEKLTLSQEANLTVLQVCNWFINARRRILPEMIRREGHDPLHYTISRRGRKQLGAGSSS
QAAAWDGEGEHEGEGEGDGDRGRDHDYGDGLLVYRSDGDEAADAEEGYSSSAISEEEVKY
DPSVWQSVIRYGPEDRDLHPAARGSAAVVTVRTAEDGEAEVSPGGGAGGWHPQLAHLPQL
PHPLRRKTDERDKFKCLYLLVETAVAVRQREQEQEEVPV