| New model in OGS2.0 | DPOGS202883 |
|---|---|
| Genomic Position | scaffold273:- 178535-184081 |
| See gene structure | |
| CDS Length | 1068 |
| Paired RNAseq reads | 258 |
| Single RNAseq reads | 753 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004159 (2e-83) |
| Best Drosophila hit | CG4061 (1e-66) |
| Best Human hit | RNA 3'-terminal phosphate cyclase isoform b (3e-84) |
| Best NR hit (blastp) | PREDICTED: similar to RNA 3 terminal phosphate cyclase [Tribolium castaneum] (3e-101) |
| Best NR hit (blastx) | PREDICTED: similar to RNA 3 terminal phosphate cyclase [Tribolium castaneum] (2e-97) |
| GeneOntology terms | GO:0005524 ATP binding GO:0003963 RNA-3'-phosphate cyclase activity GO:0005634 nucleus GO:0006396 RNA processing GO:0005654 nucleoplasm GO:0000166 nucleotide binding |
| InterPro families | IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta IPR013791 RNA 3'-terminal phosphate cyclase, subset, insert domain IPR017770 RNA 3'-terminal phosphate cyclase, subgroup IPR020719 RNA 3'-terminal phosphate cyclase-like, conserved site IPR000228 RNA 3'-terminal phosphate cyclase-like IPR013796 RNA 3'-terminal phosphate cyclase, insert domain |
| Orthology group | MCL12105 |
Nucleotide sequence:
ATGCAAGAAATAGATGGAAGCGTGCTGGAAGGGGGTGGGCAAATTCTTAGAATGTCCATA
TCACTGAGCGCTATACTGAATATACCAGTAAGAGTTACAAATATTCGAGCGGCACGCAAG
AATCCAGGGTTAGCTGCTCAACATTTAAAAGGTATTCAGCTAGTTGCAAATATGTGCCAA
GCCGAGCTTAAAGGAGCTTATATTGGATCAACAGAAATTGAGTTTACCCCCGGCAAAATC
CGAGGAGGACATTATGTTGCTGACACACAAACAGCAGGTTCAATAAGTCTGCTTATCCAA
GTGGCCCTGCCGTGTGCACTGTTTGCCGATGGCCCAACTATTATGGATTTGAAGGGCGGC
ACCAATGCGGACATGGCACCGCAGATTGATTACATGGATATGGTATTCCGGAAGATTCTT
AACAAATTTGGTGCTGATTTCAACATGCAGATTCTGAGACGCGGCTACTTTCCACGTGGT
GGAGGTCACGTTCGAGTTGAAATAACTCCGGTACATATGCTGCGTAGTATCAGTCTAATG
GATAGGGGAGAGATTGGAGACATCGGTGGAATCAGTTTCGTGGCCGGAAACTTGCCAGTC
AAGTTCGCCTATCAGATGGCAGATGGCGCTAAACATGAAATGGGATCAAATCACAGATTA
AACATCAGAAGTTACAAAGAGGACAGGTCGATGGCCCCGGACAACTGTAATGGAATCGTT
CTGTCATGTTCGACGCCGTCGTGTGTGTTGGGGGCGTGTGGCCTCGGGAGGCGCGGGGTG
AGCCCCGGGGAGGTCGGGGGCTCCGCCGGCAGACTACTGAGACAGGTCATCGACTCGGGG
GTCTGTGTGGACTCACACGCGCAGGATCAAGTGATACTGTATATGAGTCTAGCACCCGGC
CTGTCCTCGGTCCGCTCGGGCTCCTCCACTCTGCACACACAGACGGCCATTCACATAGCG
GAGACACTTGCTAAGGTTAAGTTCGAGATAACGTCAGAAGGCGGACAGGATATTATAAAG
TGTGCTGGGATCGGTCTCGTTAACAAATCCCTTCCTGAAGAACAATGA
Protein sequence:
MQEIDGSVLEGGGQILRMSISLSAILNIPVRVTNIRAARKNPGLAAQHLKGIQLVANMCQ
AELKGAYIGSTEIEFTPGKIRGGHYVADTQTAGSISLLIQVALPCALFADGPTIMDLKGG
TNADMAPQIDYMDMVFRKILNKFGADFNMQILRRGYFPRGGGHVRVEITPVHMLRSISLM
DRGEIGDIGGISFVAGNLPVKFAYQMADGAKHEMGSNHRLNIRSYKEDRSMAPDNCNGIV
LSCSTPSCVLGACGLGRRGVSPGEVGGSAGRLLRQVIDSGVCVDSHAQDQVILYMSLAPG
LSSVRSGSSTLHTQTAIHIAETLAKVKFEITSEGGQDIIKCAGIGLVNKSLPEEQ