| New model in OGS2.0 | DPOGS202886 |
|---|---|
| Genomic Position | scaffold273:- 121629-130351 |
| See gene structure | |
| CDS Length | 1974 |
| Paired RNAseq reads | 1428 |
| Single RNAseq reads | 3167 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004163 (0.0) |
| Best Drosophila hit | CG3511 (0.0) |
| Best Human hit | peptidylprolyl isomerase domain and WD repeat-containing protein 1 (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to peptidylprolyl isomerase domain and WD repeat containing 1 isoform 1 [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to peptidylprolyl isomerase domain and WD repeat containing 1 isoform 1 [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0008380 RNA splicing GO:0005634 nucleus GO:0003755 peptidyl-prolyl cis-trans isomerase activity GO:0006457 protein folding GO:0005681 spliceosomal complex GO:0006397 mRNA processing GO:0016853 isomerase activity |
| InterPro families | IPR015891 Cyclophilin-like IPR011046 WD40 repeat-like-containing domain IPR002130 Peptidyl-prolyl cis-trans isomerase, cyclophilin-type IPR017986 WD40-repeat-containing domain IPR019781 WD40 repeat, subgroup IPR001680 WD40 repeat IPR015943 WD40/YVTN repeat-like-containing domain |
| Orthology group | MCL11401 |
Nucleotide sequence:
ATGATGAATCAGTTCAAACAACTGAGTCATAAGGTCAGAATTGGTGACGATAAAGGTGAT
CGTCCTCTCCGTCTCGTTCGCTCTAACGTAGAACAGCACGTGTGTGACGAGGCTGGATGG
AAAAGACCTAACGCATTGAGAGAGGAATCTGATGATGGGGAAGGATGGATTGGTCCTTTG
CCATCTGAAGCCGCGACTATAGAAGCCGAGCCTAAATCAAAGAAAAGAAAAATTCTTGAG
TTTGAATCCCTGTATCTGGAAAATCTACCGTCATCTGAGACATATGAACGAAGTTACATG
CACAGGGATGTTGTGACTCATGTAGTTGTTACGAAAACAGATTTTGTGATAACAGCCAGC
CAGGACGGACATTTGAAGTTTTGGAAAAAACAGGAAGAAGGCATAGAGTTTGTGAAGCAT
TTCCGCTGCCATCTCGCTCCTATCAGTCATGTCGCGACCAACAGTACCGGCACACTGCTA
TGTACTGCCTCCACCGAGAAGACCATTAAAGTGTTTGATGTTGTTAATTTTGACATGATA
AATATGATATCTATAGAGTTTGAGCCGTACTGTACCGAGTGGGTACATTCAGCCGGAGAT
CCTATATCAGCATTGGCCATATCAGAAAAAGGCAGTAATAAAATTCACATATTCGACGGC
ACGCAGGCCTCAGGGACGCCGCTCCATACATTTGAGAAACATCAAAAGGAAGTGGTGACC
ATCAGGTACAACCCTGTGTTCGAGGTAGCGGTGTCCGTGGACAAGGCGGGCATAGTGGAG
TACTGGACCGGCCCCAAACACGAATACCAATATCCGAAAAATGTCAAATTCACATCCAAA
TTGGACACGGATTTATTCGATTTTGTCAAAAACAAGACTTATCCGACGGCTCTGGACTTT
TCACCTGACGGCAGGAAAATAGCCGCAATCAGTCTAGACAGAAAGGTGAGAGTGTTCCAT
TTCCTGACGGGGAAGCTGCACAAGGTATTGGACGAGAGTCTGCAGCGCTTCCAAGAACTG
CAGCATCAGACGCAACAGCTGCCAAACATGGAGTTCGGGAGAAGGATGGCGACGGAGCGC
GACCTGGATAAGTCCGAGTACAGCCAGCTGGCAAACATAGTGTTCGACGCAAGTGGTCAC
TTTGTTCTGTACGCGACCATGCTGGGGGTGAAGGTGGTCAATCTGACCACCAATCGCTGC
GTGTCCATGCTGGCGAAGCCGGAGAACCTGCGACCGCTGCAGTTGGCGCTATTCCAGGGT
CGCACTAACCAATCGAAAGTGGCAGCCACCCTGGAGATGGAAGGGTCAGAGAACCCCACG
CTCCTGAGCGTCAAGACTGACCCCACGTTGTTCTGCACGGGGTACAAGAAGAACAGATTC
TACATGTTCTCCAGACGAGGCCCCGATGACCTGCACACCGAGGCCGACAGGGACGTGTTC
AACGAGAAACCGTCCAAGGAGGACATCATATCAGCTACCGAGGGACAGGGTGTCCAGCGT
CTGTACGAGCAGGCCATCCTCCACACGTCCCTGGGCGACGTCCACATCCGGCTGTTCGGC
AAAGACGTTCCCAAGACGGTGGAGAACTTCTGCGGGCACGCGAGGAACGGTTACTTCAAC
GGACACATCTTCCACAGGGTCATCAAGGGATTCATGGTGCAGACGGGAGACCCCACCGGT
ACGGGCACGGGCGGGGAGAGCATCTGGGGCGGGGAGTTCGCCGACGAGTTCAAGCCGCAG
CTGAAACACGACCGGCCCTACACCGTCAGCATGGCCAACGCCGGCCCCAACACCAACGGC
AGCCAGTTCTTCATCACGCTCGCGCCCACTCCGTGGCTAGACAACAAGCACACTGTGTTC
GGCCGAGTGGTCCGCGGCATGGAGGTCGTCCAGAACATCGGGAGCGTCAAAACAAACCCC
AAGACGGACAAGCCCTACGACGACGTCCGAGTCATATCCGTTACTGTCAAATAA
Protein sequence:
MMNQFKQLSHKVRIGDDKGDRPLRLVRSNVEQHVCDEAGWKRPNALREESDDGEGWIGPL
PSEAATIEAEPKSKKRKILEFESLYLENLPSSETYERSYMHRDVVTHVVVTKTDFVITAS
QDGHLKFWKKQEEGIEFVKHFRCHLAPISHVATNSTGTLLCTASTEKTIKVFDVVNFDMI
NMISIEFEPYCTEWVHSAGDPISALAISEKGSNKIHIFDGTQASGTPLHTFEKHQKEVVT
IRYNPVFEVAVSVDKAGIVEYWTGPKHEYQYPKNVKFTSKLDTDLFDFVKNKTYPTALDF
SPDGRKIAAISLDRKVRVFHFLTGKLHKVLDESLQRFQELQHQTQQLPNMEFGRRMATER
DLDKSEYSQLANIVFDASGHFVLYATMLGVKVVNLTTNRCVSMLAKPENLRPLQLALFQG
RTNQSKVAATLEMEGSENPTLLSVKTDPTLFCTGYKKNRFYMFSRRGPDDLHTEADRDVF
NEKPSKEDIISATEGQGVQRLYEQAILHTSLGDVHIRLFGKDVPKTVENFCGHARNGYFN
GHIFHRVIKGFMVQTGDPTGTGTGGESIWGGEFADEFKPQLKHDRPYTVSMANAGPNTNG
SQFFITLAPTPWLDNKHTVFGRVVRGMEVVQNIGSVKTNPKTDKPYDDVRVISVTVK