| New model in OGS2.0 | DPOGS202890 |
|---|---|
| Genomic Position | scaffold273:- 79468-83876 |
| See gene structure | |
| CDS Length | 1941 |
| Paired RNAseq reads | 59995 |
| Single RNAseq reads | 205912 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004165 (5e-44) |
| Best Drosophila hit | elongation factor 2b, isoform B (0.0) |
| Best Human hit | elongation factor 2 (0.0) |
| Best NR hit (blastp) | translation elongation factor 2 isoform 1 [Bombyx mori] (0.0) |
| Best NR hit (blastx) | translation elongation factor 2 isoform 1 [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0003674 molecular_function GO:0005575 cellular_component GO:0008150 biological_process |
| InterPro families | IPR020568 Ribosomal protein S5 domain 2-type fold IPR009022 Elongation factor G/III/V IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel IPR000640 Translation elongation factor EFG/EF2, C-terminal IPR005517 Translation elongation factor EFG/EF2, domain IV IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup |
| Orthology group | MCL10253 |
Nucleotide sequence:
ATGCAGTGTCCGGAAGTGGCCGTGGGTGGTATCTACGGTGTACTGAACAGACGGCGCGGT
CACGTGTTCGAGGAGTCCCAGGTGGCTGGTACGCCCATGTTCGTGGTGAAGGCCTACCTG
CCCGTAAACGAGTCGTTCGGGTTCACCGCCGACCTCCGCTCCAACACCGGCGGACAGGCC
TTCCCGCAGTGCGTGTTCGACCACTGGCAGATCCTCCCCGGTGACCCCAGCGAACCCGGC
AGCAAACCATTCGCCGTCGTTCAGGATCTGTATGAGAAGACCATCCAGCGTACAATTCTC
ATGATGGGTCGTTATGTTGAGGCTATCGAGGATGTGCCTTCCGGTAACATCTGTGGTCTG
GTTGGTGTCGACCAGTTCCTTGTCAAGACTGGTACTATCACTACCTTCAAGAATGCCCAC
AACATGAAGGTCATGAAGTTCAGTGTGTCCCCTGTTGTGCGTGTAGCCGTAGAGCCCAAG
AACCCTGCAGACTTGCCCAAACTCGTGGAAGGTCTGAAGCGTCTCGCCAAGTCCGATCCT
ATGGTGCAATGCATCAATGAGGAGTCTGGTGAATATATTGTAGCTGGTGCTGGTGAACTG
CATCTTGAAATCTGTCTTAAGGACTTGGAGGAAGACCATGCTTGCATTCCAATCAAGAAA
TCAGACCCTGTCGTGTCTTACCGTGAAACTGTTAATGAGGAATCCAACCAGATGTGCCTT
TCCAAATCTCCCAACAAGCACAACCGTTTGTTCATGAAAGCTACCCCTATGCCCGAGGGT
CTGCCTGAAGATATTGATGAGGGTAAAGTGAACCCACGTGACGACTTCAAGACCCGTGCC
CGTTATCTGGGAGAGAAATACGAGTATGACGTCACTGAAGCCCGTAAAATCTGGTGCTTC
GGACCCGACAGCACGGGACCCAACATCCTCGTGGACTGTACCAAAGGAGTGCAGTATCTT
AATGAAATCAAGGATTCCGTGGTCGCTGGGTTCCAGTGGGCCGCCAGGGAAGGTGTCATG
GCCGAGGAGAATCTGAGAGGAGTGCGGTTCAACATTTACGACGTTACATTACACACTGAC
GCTATCCACAGAGGTGGAGGTCAAATCATTCCAACAACCCGTCGTTGCCTGTACGCGTGT
CTGCTCACAGCCTCACCGCGTCTTATGGAGCCCGTATACTTGTGTGAGATTCAGTGTCCG
GAAGTGGCCGTGGGTGGTATCTACGGTGTACTGAACAGACGGCGCGGTCACGTGTTCGAG
GAGTCCCAGGTGGCTGGTACGCCCATGTTCGTGGTGAAGGCCTACCTGCCCGTAAACGAG
TCGTTCGGGTTCACCGCCGACCTCCGCTCCAACACCGGCGGACAGGCCTTCCCGCAGTGC
GTGTTCGACCACTGGCAGATCCTCCCCGGTGACCCCAGCGAACCCGGCAGCAAACCATTC
GCCGTCGTTCAGGATCTGTATGAGAAGACCATCCAGCGTACAATTCTCATGATGGGTCGT
TATGTTGAGGCTATCGAGGATGTGCCTTCCGGTAACATCTGTGGTCTGGTTGGTGTCGAC
CAGTTCCTTGTCAAGACTGGTACTATCACTACCTTCAAGAATGCCCACAACATGAAGGTC
ATGAAGTTCAGTGTGTCCCCTGTTGTGCGTGTAGCCGTAGAGCCCAAGAACCCTGCAGAC
TTGCCCAAACTCGTGGAAGGTCTGAAGCGTCTCGCCAAGTCCGATCCTATGGTGCAATGC
ATCAATGAGGAGTCTGGTGAATATATTGTAGCTGGTGCTGGTGAACTGCATCTTGAAATC
TGTCTTAAGGACTTGGAGGAAGACCATGCTTGCATTCCAATCAAGAAATCAGACCCTGTC
GTGTCTTACCATGAACAGCTGATGGTTTACAAGCTCAACAGGCCTGACGTTACGCCGGAT
AACTCGTCGAGCACATGCTAG
Protein sequence:
MQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQA
FPQCVFDHWQILPGDPSEPGSKPFAVVQDLYEKTIQRTILMMGRYVEAIEDVPSGNICGL
VGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDP
MVQCINEESGEYIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVNEESNQMCL
SKSPNKHNRLFMKATPMPEGLPEDIDEGKVNPRDDFKTRARYLGEKYEYDVTEARKIWCF
GPDSTGPNILVDCTKGVQYLNEIKDSVVAGFQWAAREGVMAEENLRGVRFNIYDVTLHTD
AIHRGGGQIIPTTRRCLYACLLTASPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFE
ESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPSEPGSKPF
AVVQDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKV
MKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEYIVAGAGELHLEI
CLKDLEEDHACIPIKKSDPVVSYHEQLMVYKLNRPDVTPDNSSSTC