New model in OGS2.0 | DPOGS202894  |
---|---|
Genomic Position | scaffold273:- 12143-13576 |
See gene structure | |
CDS Length | 375 |
Paired RNAseq reads   | 22 |
Single RNAseq reads   | 300 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004168 (1e-31) |
Best Drosophila hit   | ion transport peptide, isoform E (2e-14) |
Best Human hit | ND |
Best NR hit (blastp)   | CHH-like protein precursor [Bombyx mori] (1e-33) |
Best NR hit (blastx)   | ion-transport peptide precursor-like protein [Manduca sexta] (2e-35) |
GeneOntology terms    | GO:0005184 neuropeptide hormone activity GO:0007218 neuropeptide signaling pathway GO:0005179 hormone activity GO:0005576 extracellular region |
InterPro families    | IPR001166 Crustacean neurohormone IPR018251 Crustacean neurohormone, conserved site |
Orthology group | MCL16608 |
Nucleotide sequence:
ATGGTGGCGGTGGTGGCGGTGGTGGTGGCCGCGCCCCCCTCCACTCCTCACCACGTCGCC
CGTCGCTCCTTCTTCAACCTCCAGTGCAAGGGAGTCTACGACGCCGCCATCTTCGCTCGT
CTGGACCGCATCTGCGACGACTGCTACAACCTCTTCAGGGAGCCGACGCTCTTCACCCTG
TGCAGGCAAGACTGTTTCACGACAGATTACTTCAAAGGCTGCGTGGAAGTGCTCCAAGAG
ACGGACCAGCTAGAACTCTTCAAGACGTCGAAATGCTTCACGTCGCCCTACTTCAAGGGC
TGCATGGAGTCCTTGTACCTCTACGACGAGGAGGAACAGCTTGATCAAATGATCGACTTC
ATCGGTAAACGCTAA
Protein sequence:
MVAVVAVVVAAPPSTPHHVARRSFFNLQCKGVYDAAIFARLDRICDDCYNLFREPTLFTL
CRQDCFTTDYFKGCVEVLQETDQLELFKTSKCFTSPYFKGCMESLYLYDEEEQLDQMIDF
IGKR