New model in OGS2.0 | DPOGS202914  |
---|---|
Genomic Position | scaffold273:+ 158429-163705 |
See gene structure | |
CDS Length | 1692 |
Paired RNAseq reads   | 1267 |
Single RNAseq reads   | 3337 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004195 (3e-28) |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | hypothetical protein LOC100141786 [Tribolium castaneum] (7e-12) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC009372 [Tribolium castaneum] (6e-09) |
GeneOntology terms   | ND |
InterPro families    | IPR001849 Pleckstrin homology domain IPR011993 Pleckstrin homology-type |
Orthology group | MCL18997 |
Nucleotide sequence:
ATGTCTGGTTACCTTGAAGTGAAATATCCGTTTAGATCGAACCTTGGTTTGAATCCTTTC
AAGTCTTGGAAGAGACAATGGTGTATATTGCGGCCTAGTCCCACGACTGTGGGAGGTTCT
CTGGCCGTGTACTGCAGTGAGGCTGGGGCTGCAGCGGGCACCGTCGAGTTGCGATCAGGT
TGCACTGTGAAACGTGCCAAGTCTCGCACAAGGCCCCACGCTTTCGCTGTGTTTTCCGTC
GGAGAACCCTGCAAGCCTCGCATCCTGTTGGCAGCACAGACTCTCCAGGAAGCCCAACAG
TGGATGGACAAAATTCGTGACTTACTGAATGGCGAGAAACTATTAGGCACTGAAACATTA
TTAAAAGATTCCTATACTGTGACAATTATACCCACGGCATTCTCTGATAAGTGCGGTATA
ACAAACGAGTGCCATGTGACGCTGTCCCCTAATGGTCTCCAGCTGTGCTGTCCGCCCACC
GACACAGTTATACATTGGCAGAACATTACAGAAGTTCTGCATACAAGAGAAACCGGGGAC
AAGAATAGAATTTGTACCCTTAATATTCATAGCGAGTCTCAAGGCGGCGGTTGTGTGCGC
ATGCGCGGCGCCGCGGCCGGTGAGTTGGCGGGCGCGGTCCGCGGGACGCTGAGGGATCGC
GCGCGAGCGAGACTCAGTCGCAGCCAGCCAGAGCTCACTTCAGCGTGTCTTAACGCCGCG
GATATTCGTCGCAGCAGTTGGTACAGCGGGCCGTCGGAAATATCACTGGACGACACTGAC
CTCATAATGTCCAAGGAGGCTCAGCACATTCCTTCAAGTCAACTGTCTCGTTGTAGTGGA
GCTGGCGACCTCGCCTCCCGCGCTCGGAGGCTCCTCAGGACCTCGGCCGATGACAGCGTG
AGTTCCCGGTCCTTGGCGTCTCTCGCGTCGCTGGTGTCGTCGTCATCGGGCGTGTACGAG
GAGATAGCGGAGGAGGAGCATACGTACGAGGCGATAGGACTGTACGGAACCGCGCGCCGA
CCGAAGCGACATCCGCCGCCACTACCGCCTCGCCAACCATACTGTACCCTGAACCGCGGT
CAGTCGTGGCGCGAGGCGGAGAAGGTGACCAGACACTCCTCACTCGGCTCACTCACACAC
AAACAGAGACACCATAAGACATTCAGTGTCTTCAGAAAAAGACTGAAGAGTGACTCCCGC
ATAGCGACATCACCGAAATCAGAGACCAAAGACAAAGACGTGGAGACGAAGAAGAAAAAG
TTCGACTTCACGCCCACACGAGACATATTCAAGAGCTTTAAAGTGAGCCGCAAGATGAAG
AACCTGAAGATAACGTCCGGCCTGGCCAAGGGAGAGACCAAGAGCTGCGAGTTCCTGGAC
GAGGCGCAGCACGTGACGAGCAACAGGTGCTCCAAGTCTGTGGAGTGTTTGGAAGACACC
TACGAGTTCCTCGACGACTACCACGGAAACCTGTCCCTGAGTGACGCCGACGAGGCGCTG
GCTCTGCCGCAAGAGATCGTCGAGTTGATACTGCGCGGCCCGGACCTGAAAGTTAGATTA
AAAGACACTCAGTGCGAGAGCGACTACGTCCCCATGTCGCCCATAGTGCCCATACTGCCC
ATGGTGCCCATGGTGCCGCCGCCCATAGAACATCACTATATGGTGATGTCGCCCCGCACT
AATATAGCTTGA
Protein sequence:
MSGYLEVKYPFRSNLGLNPFKSWKRQWCILRPSPTTVGGSLAVYCSEAGAAAGTVELRSG
CTVKRAKSRTRPHAFAVFSVGEPCKPRILLAAQTLQEAQQWMDKIRDLLNGEKLLGTETL
LKDSYTVTIIPTAFSDKCGITNECHVTLSPNGLQLCCPPTDTVIHWQNITEVLHTRETGD
KNRICTLNIHSESQGGGCVRMRGAAAGELAGAVRGTLRDRARARLSRSQPELTSACLNAA
DIRRSSWYSGPSEISLDDTDLIMSKEAQHIPSSQLSRCSGAGDLASRARRLLRTSADDSV
SSRSLASLASLVSSSSGVYEEIAEEEHTYEAIGLYGTARRPKRHPPPLPPRQPYCTLNRG
QSWREAEKVTRHSSLGSLTHKQRHHKTFSVFRKRLKSDSRIATSPKSETKDKDVETKKKK
FDFTPTRDIFKSFKVSRKMKNLKITSGLAKGETKSCEFLDEAQHVTSNRCSKSVECLEDT
YEFLDDYHGNLSLSDADEALALPQEIVELILRGPDLKVRLKDTQCESDYVPMSPIVPILP
MVPMVPPPIEHHYMVMSPRTNIA